Co-expression analysis

Gene ID	TaAffx.80002.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At4g13530: unknown protein (HF=6e-2)
Module size	6 genes
NF	0.01
%ile	2.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.2	0.69	TaAffx.80002.1.S1_at	CA704464	-	-	6e-2	At4g13530	unknown protein	O.I.	H.G.	S.X.	Please select
0.02	3.6	0.91	Ta.21559.3.S1_x_at	CA604257	-	-	3e-4	At5g24420	glucosamine/galactosamine-6-phosphate isomerase-related	O.I.	H.G.	S.X.	Please select
0.02	3.6	0.87	Ta.3708.3.S1_x_at	CA655038	-	-	5e-15	At4g00850	GIF3 (GRF1-INTERACTING FACTOR 3)	O.I.	H.G.	S.X.	Please select
0.02	3.6	0.95	Ta.28649.3.S1_x_at	BJ321003	-	-	8e-4	At4g19200	proline-rich family protein	O.I.	H.G.	S.X.	Please select
0.01	2.4	0.93	Ta.28649.1.S1_x_at	BJ309733	-	-	1e-5	At4g19200	proline-rich family protein	O.I.	H.G.	S.X.	Please select
-	0.7	0.92	Ta.7234.2.S1_at	BJ269596	-	-	2e-8	At2g45010	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
10.8	99.2	GSM138162	genotype E5 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
6.7	98.4	GSM138203	genotype F44 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
3.4	95.2	GSM111239	genotype A91 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
3.4	95.2	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
3.1	94.5	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
2.9	94.0	GSM111185	genotype C22 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
2.9	94.0	GSM246391	SB62_Stem_ rep2_at anthesis	GSE9767	Genotypic differences in water soluble carbohydrate metabolism in stem
2.8	93.6	GSM111233	genotype H8 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
2.7	93.3	GSM111236	genotype F38b developing seed at 5 days after anthesis, biological rep1	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
2.7	93.3	GSM111227	genotype F48 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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