Co-expression analysis

Gene ID TaAffx.79864.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At5g27670: HTA7 (HISTONE H2A 7) (HF=1e+1)
Module size 9 genes
NF 0.37
%ile 59.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8994.60.90TaAffx.79864.1.S1_atCA707155--1e+1At5g27670HTA7 (HISTONE H2A 7)O.I.H.G.S.X.
0.3854.70.96Ta.6759.2.S1_x_atBJ211299--2e+0At5g63310NDPK2 (NUCLEOSIDE DIPHOSPHATE KINASE 2)O.I.H.G.S.X.
0.3651.90.94TaAffx.118866.1.S1_atCA742026--8e-2At5g57570-O.I.H.G.S.X.
0.3651.90.94TaAffx.53697.1.S1_x_atCA689880Ubiquitin carrier protein-9e-1At1g03470kinase interacting family proteinO.I.H.G.S.X.
0.3346.90.94TaAffx.78163.1.S1_atCA736625--9e-3At4g08868unknown proteinO.I.H.G.S.X.
0.3346.90.96Ta.25608.2.S1_a_atCA739102--3e+0At1g77765unknown proteinO.I.H.G.S.X.
0.2532.10.94TaAffx.31269.1.S1_atCA617980--2e+0At3g03010aminoacyl-tRNA hydrolaseO.I.H.G.S.X.
0.1922.40.95Ta.16180.1.A1_atBJ322793--1e+0At1g034102A6O.I.H.G.S.X.
0.1922.40.96Ta.6759.2.S1_atBJ211299--2e+0At5g63310NDPK2 (NUCLEOSIDE DIPHOSPHATE KINASE 2)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
6.698.3GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
5.998.0GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
5.297.5GSM298092Crown tissue of Solstice at 3 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO
4.797.1GSM298091Leaf tissue of Solstice at 9 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO
4.496.8GSM315203target strand labeled: Antisense - rep1GSE12528Wheat "Chinese Spring" natural antisense transcription surveyLink to GEO
4.396.7GSM250897TcLr1_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
3.996.1GSM250899TcLr34_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
3.795.8GSM143493Jupateco_Lr34 (resistant), mock inoculated distal leaf, replication 1GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halvesLink to GEO
3.695.6GSM250896Tc_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
3.695.6GSM138162genotype E5 developing seed at 5 days after anthesis, biological rep1GSE5939Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB locationLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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