Co-expression analysis

Gene ID TaAffx.79761.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At5g25750: unknown protein (HF=2e-1)
Module size 6 genes
NF 0.06
%ile 14.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.20.80TaAffx.79761.1.S1_atCA708913--2e-1At5g25750unknown proteinO.I.H.G.S.X.
0.2939.20.93TaAffx.22961.1.S1_atCA742676--4e-1At4g18380F-box family proteinO.I.H.G.S.X.
0.1314.60.92Ta.24041.2.A1_x_atCA722645--1e+0At5g47330palmitoyl protein thioesterase family proteinO.I.H.G.S.X.
0.1011.30.94TaAffx.66590.1.A1_atBG909262--1e+1At4g21440ATMYB102 (ARABIDOPSIS MYB-LIKE 102)O.I.H.G.S.X.
0.034.70.92Ta.9542.3.S1_x_atCA640676--4e-3At5g01810CIPK15 (CBL-INTERACTING PROTEIN KINASE 15)O.I.H.G.S.X.
0.023.60.93TaAffx.105451.1.S1_atCA734135--1e+0At3g06730thioredoxin family proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
12.499.4GSM298067Leaf tissue of Paragon at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
12.399.4GSM250914Tc_7dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
12.199.4GSM298070Leaf tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
11.399.3GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
11.399.3GSM250899TcLr34_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
9.499.1GSM111233genotype H8 developing seed at 5 days after anthesis, biological rep2GSE4935wheat expression level polymorphism study 39 genotypes 2 biological repsLink to GEO
8.798.9GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
8.498.9GSM250895Tc_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
6.698.3GSM250908Tc_7dpi_inoculated_rep2GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
5.597.8GSM250902Tc_7dpi_inoculated_rep1GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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