Co-expression analysis

Gene ID	TaAffx.79657.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At1g78370: ATGSTU20 (GLUTATHIONE S-TRANSFERASE TAU 20) (HF=4e-3)
Module size	9 genes
NF	0.51
%ile	77.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.82	92.7	0.90	TaAffx.79657.1.S1_at	CA711220	-	-	4e-3	At1g78370	ATGSTU20 (GLUTATHIONE S-TRANSFERASE TAU 20)	O.I.	H.G.	S.X.	Please select
0.74	89.4	0.95	Ta.9983.1.S1_s_at	AY373831.1	dihydroflavonol 4-reductase /// DFR-2 /// dihydroflavonol 4-reductase 4	-	4e-5	At5g42800	DFR (DIHYDROFLAVONOL 4-REDUCTASE)	O.I.	H.G.	S.X.	Please select
0.59	79.8	0.94	TaAffx.65637.1.S1_at	BJ234904	-	-	3e-1	At1g75020	LPAT4 (LYSOPHOSPHATIDYL ACYLTRANSFERASE 4)	O.I.	H.G.	S.X.	Please select
0.58	79.2	0.91	TaAffx.52385.2.S1_x_at	CA710284	-	-	5e-5	At3g62730	unknown protein	O.I.	H.G.	S.X.	Please select
0.57	79.2	0.95	Ta.14243.1.A1_at	BQ838987	flavanone 3-dioxygenase	-	5e-6	At3g51240	F3H (FLAVANONE 3-HYDROXYLASE)	O.I.	H.G.	S.X.	Please select
0.56	78.6	0.94	Ta.10761.1.S1_at	BQ166483	-	-	2e+0	At4g35660	unknown protein	O.I.	H.G.	S.X.	Please select
0.53	74.9	0.96	Ta.22089.1.S1_at	CA721439	-	-	9e+0	At5g52760	heavy-metal-associated domain-containing protein	O.I.	H.G.	S.X.	Please select
0.40	58.4	0.94	TaAffx.106621.1.S1_at	CA714832	-	-	5e+0	At5g57887	unknown protein	O.I.	H.G.	S.X.	Please select
0.16	18.2	0.93	Ta.27573.1.S1_at	BT008942.1	-	-	3e+0	At2g12170	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
16.1	99.6	GSM314284	tissue type: 22 DAP embryo - rep1	GSE12508	Transcription patterns during wheat development
16.1	99.6	GSM298067	Leaf tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
10.5	99.2	GSM314285	tissue type: 22 DAP embryo - rep2	GSE12508	Transcription patterns during wheat development
6.8	98.4	GSM314286	tissue type: 22 DAP embryo - rep3	GSE12508	Transcription patterns during wheat development
4.1	96.4	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.8	96.0	GSM111241	genotype F82 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
3.6	95.6	GSM250896	Tc_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.4	95.2	GSM111233	genotype H8 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
3.3	95.0	GSM250899	TcLr34_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.2	94.8	GSM111205	genotype B10 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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