Co-expression analysis

Gene ID	TaAffx.79610.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At1g26762: unknown protein (HF=9e-1)
Module size	6 genes
NF	0.11
%ile	23.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.80	92.2	0.92	TaAffx.79610.1.S1_at	CA711937	-	-	9e-1	At1g26762	unknown protein	O.I.	H.G.	S.X.	Please select
0.60	81.0	0.92	TaAffx.51916.1.S1_at	CA716507	-	-	3e+0	At4g26010	peroxidase, putative	O.I.	H.G.	S.X.	Please select
0.50	72.4	0.91	TaAffx.9551.1.S1_at	CA595241	-	-	1e+0	At2g36410	unknown protein	O.I.	H.G.	S.X.	Please select
0.14	15.8	0.93	TaAffx.27409.1.S1_at	CA677175	-	-	4e+0	At1g02405	proline-rich family protein	O.I.	H.G.	S.X.	Please select
0.12	13.3	0.92	Ta.28142.2.S1_at	CA644586	-	-	3e-1	At5g47700	60S acidic ribosomal protein P1 (RPP1C)	O.I.	H.G.	S.X.	Please select
0.03	4.7	0.91	Ta.7193.2.S1_at	BG904530	-	-	3e+0	At2g34690	ACD11 (ACCELERATED CELL DEATH 11)	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
11.6	99.3	GSM298067	Leaf tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
7.5	98.6	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
6.3	98.2	GSM138162	genotype E5 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
5.0	97.4	GSM111236	genotype F38b developing seed at 5 days after anthesis, biological rep1	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
4.1	96.4	GSM298078	Leaf tissue of Solstice at 3 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
3.9	96.1	GSM298064	Crown tissue of Harnesk at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
3.2	94.8	GSM250893	TcLr34_3dpi_mock_rep2	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.2	94.8	GSM298069	Leaf tissue of Paragon at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
3.1	94.5	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.1	94.5	GSM298062	Crown tissue of Harnesk at 5 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars

Inter-species module comparison

A co-expression module including the Arabidopsis gene, At1g26762, orthologous to the query gene, TaAffx.79610.1.S1_at

VF	%ile	Gene ID	Repr. ID	Gene Name	Func.	O.I.	H.G.	S.X.	Other DB

Select a plant to compare co-expressed genes between species.

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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