Co-expression analysis

Gene ID	TaAffx.7960.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At3g60280: UCC3 (UCLACYANIN 3) (HF=3e-1)
Module size	6 genes
NF	0.08
%ile	19.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.63	83.1	0.90	TaAffx.7960.1.S1_at	CA642237	-	-	3e-1	At3g60280	UCC3 (UCLACYANIN 3)	O.I.	H.G.	S.X.	Please select
0.33	46.9	0.93	Ta.6849.1.S1_at	CK163325	-	-	8e-1	At4g21190	emb1417 (embryo defective 1417)	O.I.	H.G.	S.X.	Please select
0.31	42.7	0.91	TaAffx.56375.1.A1_at	BJ238027	-	-	1e+0	At4g00467	-	O.I.	H.G.	S.X.	Please select
0.29	39.2	0.93	Ta.9116.2.S1_a_at	CA611062	-	-	1e-12	At5g59010	protein kinase-related	O.I.	H.G.	S.X.	Please select
0.15	17.1	0.93	Ta.25250.1.A1_at	CD454945	-	-	7e-18	At1g27440	GUT2	O.I.	H.G.	S.X.	Please select
0.01	2.4	0.92	Ta.9085.2.S1_x_at	CA664366	-	-	8e-5	At3g17300	-	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
13.9	99.5	GSM138169	genotype B68 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
7.7	98.7	GSM138188	genotype F38a developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
4.6	97.0	GSM138149	genotype F29 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
4.5	96.9	GSM324490	Si+ B- rep1	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
4.1	96.4	GSM324492	Si+ B- rep3	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
3.4	95.2	GSM138154	genotype H5 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
3.4	95.2	GSM138184	genotype C25 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
3.4	95.2	GSM138215	genotype A77 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
3.3	95.0	GSM138171	genotype C31 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
3.2	94.8	GSM324491	Si+ B- rep2	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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