Co-expression analysis

Gene ID TaAffx.79524.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At5g14380: AGP6 (Arabinogalactan proteins 6) (HF=3e+0)
Module size 22 genes
NF 0.22
%ile 36.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9599.10.84TaAffx.79524.1.S1_atCA713473--3e+0At5g14380AGP6 (Arabinogalactan proteins 6)O.I.H.G.S.X.
0.3956.10.84TaAffx.106610.1.S1_atCA715093--1e+1Atmg00660-O.I.H.G.S.X.
0.3142.70.88TaAffx.57284.1.S1_atCA632821--4e+0At4g17510UCH3 (UBIQUITIN C-TERMINAL HYDROLASE 3)O.I.H.G.S.X.
0.3142.70.90TaAffx.111615.1.S1_atCA636808--1e-2At2g21060ATGRP2B (GLYCINE-RICH PROTEIN 2B)O.I.H.G.S.X.
0.3142.70.89TaAffx.22693.1.S1_atCA746804--2e+0At5g17750AAA-type ATPase family proteinO.I.H.G.S.X.
0.2735.60.91Ta.1391.2.S1_x_atCK211679--9e-11At2g24090ribosomal protein L35 family proteinO.I.H.G.S.X.
0.2633.60.92Ta.17509.1.S1_atCA621365--9e-3At3g15630unknown proteinO.I.H.G.S.X.
0.2329.00.93Ta.24856.1.S1_atCA669615--3e+0At3g07590small nuclear ribonucleoprotein D1, putative / snRNP core protein D1, putative / Sm protein D1, putativeO.I.H.G.S.X.
0.2329.00.91TaAffx.80220.1.S1_atCA699737--1e+0At2g40020-O.I.H.G.S.X.
0.2329.00.92Ta.24856.1.S1_x_atCA669615--3e+0At3g07590small nuclear ribonucleoprotein D1, putative / snRNP core protein D1, putative / Sm protein D1, putativeO.I.H.G.S.X.
0.2329.00.91TaAffx.86236.1.S1_atCA613373--3e-1At2g22260oxidoreductase, 2OG-Fe(II) oxygenase family proteinO.I.H.G.S.X.
0.2227.10.90Ta.26495.1.A1_atCD491031--3e-26At2g48070RPH1 (RESISTANCE TO PHYTOPHTHORA 1)O.I.H.G.S.X.
0.2125.50.91TaAffx.86119.1.S1_atCA616585--7e-1At1g09470unknown proteinO.I.H.G.S.X.
0.2125.50.92TaAffx.53697.1.S1_x_atCA689880Ubiquitin carrier protein-9e-1At1g03470kinase interacting family proteinO.I.H.G.S.X.
0.2125.50.92Ta.10340.1.S1_atBJ250665--1e+0At5g09470mitochondrial substrate carrier family proteinO.I.H.G.S.X.
0.1821.00.93TaAffx.112465.1.S1_atCA623726--3e-13At4g00360CYP86A2 (CYTOCHROME P450 86 A2)O.I.H.G.S.X.
0.1821.00.93TaAffx.121565.1.S1_atCA650791--1e+0At4g09530auxin-responsive family proteinO.I.H.G.S.X.
0.1719.80.89TaAffx.39463.1.S1_atBG904896--8e-1At4g28730glutaredoxin family proteinO.I.H.G.S.X.
0.1517.10.92Ta.14084.1.S1_x_atCK163605--2e+1At4g15550IAGLU (INDOLE-3-ACETATE BETA-D-GLUCOSYLTRANSFERASE)O.I.H.G.S.X.
0.1415.80.91Ta.3336.2.A1_atBG904139--6e+0At4g18620-O.I.H.G.S.X.
0.1112.40.91Ta.12290.2.S1_atBJ260055--4e-1At1g20696HMGB3 (HIGH MOBILITY GROUP B 3)O.I.H.G.S.X.
0.1011.30.88TaAffx.86676.1.S1_s_atCA603044--8e-1At1g15900unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
9.599.1GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
9.499.1GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
8.598.9GSM250895Tc_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
7.098.5GSM250896Tc_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
6.598.3GSM298070Leaf tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
6.198.1GSM298092Crown tissue of Solstice at 3 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO
5.597.8GSM250899TcLr34_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
5.397.6GSM298067Leaf tissue of Paragon at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
4.897.2GSM314256tissue type: germinating seed, root - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
4.196.4GSM250897TcLr1_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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