Co-expression analysis

Gene ID TaAffx.79435.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At5g10140: FLC (FLOWERING LOCUS C) (HF=2e-1)
Module size 6 genes
NF 0.00
%ile 0.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.20.76TaAffx.79435.1.S1_atCA715785--2e-1At5g10140FLC (FLOWERING LOCUS C)O.I.H.G.S.X.
0.023.60.84TaAffx.53068.1.S1_atCA696960--1e+0At1g32760glutaredoxin family proteinO.I.H.G.S.X.
0.023.60.87TaAffx.122619.1.S1_atCA731643--4e+0At4g18500unknown proteinO.I.H.G.S.X.
0.012.40.86TaAffx.110661.1.S1_atCA656444--3e+0At4g19100unknown proteinO.I.H.G.S.X.
-0.70.86TaAffx.85202.1.S1_atCA619121--1e+0At2g46330AGP16 (ARABINOGALACTAN PROTEIN 16)O.I.H.G.S.X.
-0.70.87TaAffx.109199.1.S1_atCA678792--3e-1At4g35025unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
21.399.7GSM314277tissue type: pistil, before anthesis - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
20.999.7GSM314276tissue type: pistil, before anthesis - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
20.699.7GSM314275tissue type: pistil, before anthesis - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
17.599.7GSM111233genotype H8 developing seed at 5 days after anthesis, biological rep2GSE4935wheat expression level polymorphism study 39 genotypes 2 biological repsLink to GEO
9.899.1GSM250899TcLr34_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
8.298.8GSM298067Leaf tissue of Paragon at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
3.996.1GSM111217genotype D15 developing seed at 5 days after anthesis, biological rep2GSE4935wheat expression level polymorphism study 39 genotypes 2 biological repsLink to GEO
3.896.0GSM138216genotype H9 developing seed at 5 days after anthesis, biological rep2GSE5939Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB locationLink to GEO
3.795.8GSM138149genotype F29 developing seed at 5 days after anthesis, biological rep3GSE5939Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB locationLink to GEO
3.395.0GSM143511Thatcher_Lr34 (resistant), mock inoculated distal leaf, replication 1GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halvesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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