Co-expression analysis

Gene ID	TaAffx.79347.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At1g77855: unknown protein (HF=6e-2)
Module size	13 genes
NF	0.27
%ile	44.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.89	94.6	0.76	TaAffx.79347.1.S1_at	CA717802	-	-	6e-2	At1g77855	unknown protein	O.I.	H.G.	S.X.	Please select
0.39	56.1	0.88	TaAffx.30110.1.S1_at	CA628372	-	-	4e+0	At3g28560	-	O.I.	H.G.	S.X.	Please select
0.36	51.9	0.89	TaAffx.31195.1.S1_x_at	CA618611	-	-	8e-1	At1g21770	-	O.I.	H.G.	S.X.	Please select
0.34	48.1	0.88	Ta.24611.1.S1_at	BJ315951	-	-	1e+0	At5g17150	-	O.I.	H.G.	S.X.	Please select
0.34	48.1	0.88	TaAffx.46586.2.A1_at	CA702984	-	-	4e+0	At3g61370	unknown protein	O.I.	H.G.	S.X.	Please select
0.33	46.9	0.90	TaAffx.57313.1.S1_at	CA632118	-	-	1e+0	At5g44080	bZIP transcription factor family protein	O.I.	H.G.	S.X.	Please select
0.30	40.9	0.89	Ta.9340.2.S1_at	CA726547	-	-	2e-10	At4g31750	WIN2 (HOPW1-1-INTERACTING 2)	O.I.	H.G.	S.X.	Please select
0.22	27.1	0.88	Ta.16941.1.S1_at	CA615563	-	-	4e+0	At5g44610	MAP18 (Microtubule-associated Protein 18)	O.I.	H.G.	S.X.	Please select
0.21	25.5	0.92	TaAffx.5994.1.S1_at	CA693717	-	-	1e+1	At5g41400	zinc finger (C3HC4-type RING finger) family protein	O.I.	H.G.	S.X.	Please select
0.21	25.5	0.90	TaAffx.77845.1.S1_at	CA741845	-	-	3e-1	At5g67500	VDAC2 (VOLTAGE DEPENDENT ANION CHANNEL 2)	O.I.	H.G.	S.X.	Please select
0.14	15.8	0.89	TaAffx.27716.1.S1_at	CA671981	-	-	1e+0	At5g13870	EXGT-A4 (ENDOXYLOGLUCAN TRANSFERASE A4)	O.I.	H.G.	S.X.	Please select
0.13	14.6	0.89	Ta.9304.2.S1_a_at	CA744381	-	-	9e-2	At5g63460	SAP domain-containing protein	O.I.	H.G.	S.X.	Please select
0.13	14.6	0.88	Ta.9069.3.A1_at	CA736508	-	-	1e-12	At2g46230	-	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
8.7	98.9	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.8	97.9	GSM298067	Leaf tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
5.1	97.5	GSM315202	target strand labeled: Sense - rep1	GSE12528	Wheat "Chinese Spring" natural antisense transcription survey
5.0	97.4	GSM139914	Anther pre-meiosis rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.9	97.3	GSM314253	tissue type: germinating seed, coleoptile - rep3	GSE12508	Transcription patterns during wheat development
4.7	97.1	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
3.9	96.1	GSM314252	tissue type: germinating seed, coleoptile - rep2	GSE12508	Transcription patterns during wheat development
3.8	96.0	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.5	95.4	GSM314251	tissue type: germinating seed, coleoptile - rep1	GSE12508	Transcription patterns during wheat development
3.5	95.4	GSM111233	genotype H8 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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