Co-expression analysis

Gene ID	TaAffx.79150.1.S1_x_at
Gene name
Homology with Arabidopsis	Similar to At5g17650: glycine/proline-rich protein (HF=3e+0)
Module size	11 genes
NF	0.39
%ile	62.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.82	92.7	0.85	TaAffx.79150.1.S1_x_at	CA720712	-	-	3e+0	At5g17650	glycine/proline-rich protein	O.I.	H.G.	S.X.	Please select
0.52	73.7	0.87	Ta.12247.1.S1_at	BQ171937	-	-	2e+0	At5g18880	-	O.I.	H.G.	S.X.	Please select
0.48	69.0	0.91	Ta.9791.1.S1_at	CA651818	-	-	1e+0	At3g56740	ubiquitin-associated (UBA)/TS-N domain-containing protein	O.I.	H.G.	S.X.	Please select
0.42	60.9	0.87	Ta.9173.1.S1_at	CK217821	-	-	5e-3	At5g23760	heavy-metal-associated domain-containing protein	O.I.	H.G.	S.X.	Please select
0.36	51.9	0.89	Ta.4230.1.S1_at	CA641922	-	-	2e+0	At3g20310	ERF7 (ETHYLINE RESPONSE FACTOR 7)	O.I.	H.G.	S.X.	Please select
0.35	49.8	0.91	Ta.22166.1.A1_at	CA727726	-	-	3e-1	At1g09230	RNA recognition motif (RRM)-containing protein	O.I.	H.G.	S.X.	Please select
0.30	40.9	0.89	Ta.22166.1.A1_x_at	CA727726	-	-	3e-1	At1g09230	RNA recognition motif (RRM)-containing protein	O.I.	H.G.	S.X.	Please select
0.30	40.9	0.93	Ta.7152.2.S1_at	CD894757	-	-	1e-12	At5g54670	ATK3 (ARABIDOPSIS THALIANA KINESIN 3)	O.I.	H.G.	S.X.	Please select
0.24	30.3	0.91	Ta.25478.1.S1_at	CA645803	-	-	3e-8	At1g54560	XIE	O.I.	H.G.	S.X.	Please select
0.23	29.0	0.90	Ta.9309.1.A1_x_at	CK157795	-	-	8e-2	At1g72310	ATL3	O.I.	H.G.	S.X.	Please select
0.22	27.1	0.89	Ta.5365.1.S1_at	BJ286841	-	-	7e-2	At3g05690	NF-YA2 (NUCLEAR FACTOR Y, SUBUNIT A2)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
5.5	97.8	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
5.3	97.6	GSM314276	tissue type: pistil, before anthesis - rep2	GSE12508	Transcription patterns during wheat development
4.9	97.3	GSM298058	Leaf tissue of Harnesk at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
4.7	97.1	GSM298090	Leaf tissue of Solstice at 5 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
4.1	96.4	GSM298057	Leaf tissue of Harnesk at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
3.6	95.6	GSM343678	Wheat var. Kennedy_control_rep1	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
3.4	95.2	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.2	94.8	GSM139928	Anther immature pollen rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.2	94.8	GSM314277	tissue type: pistil, before anthesis - rep3	GSE12508	Transcription patterns during wheat development
3.1	94.5	GSM343688	Wheat var. Kennedy_Fp inoculated_rep3	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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