Co-expression analysis

Gene ID	TaAffx.78822.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At5g01075: beta-galactosidase (HF=1e+0)
Module size	6 genes
NF	0.61
%ile	87.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.50	72.4	0.96	TaAffx.78822.1.S1_at	CA726823	-	-	1e+0	At5g01075	beta-galactosidase	O.I.	H.G.	S.X.	Please select
0.83	93.4	0.96	TaAffx.82721.1.S1_at	CA668034	-	-	3e+1	At4g20780	calcium-binding protein, putative	O.I.	H.G.	S.X.	Please select
0.71	88.0	0.96	TaAffx.110652.1.S1_at	CA656567	-	-	1e-2	At2g23690	unknown protein	O.I.	H.G.	S.X.	Please select
0.71	88.0	0.96	TaAffx.114049.1.S1_at	CA599641	-	-	5e+0	At4g33560	unknown protein	O.I.	H.G.	S.X.	Please select
0.55	76.8	0.96	TaAffx.132656.2.S1_at	CA600729	-	-	1e+0	At1g76500	SOB3 (SUPPRESSOR OF PHYB-4#3)	O.I.	H.G.	S.X.	Please select
0.37	53.0	0.96	TaAffx.85941.1.S1_at	CA618291	-	-	2e+1	At5g23760	heavy-metal-associated domain-containing protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
14.8	99.5	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
10.1	99.2	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
7.9	98.7	GSM314276	tissue type: pistil, before anthesis - rep2	GSE12508	Transcription patterns during wheat development
7.7	98.7	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
7.6	98.7	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
6.3	98.2	GSM138209	genotype H23 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
5.2	97.5	GSM250896	Tc_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.1	97.5	GSM143502	Thatcher_Lr34 (resistant), rust inoculated basal leaf, replication 1	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
5.0	97.4	GSM143505	Thatcher_Lr34 (resistant), rust inoculated distal leaf, replication 1	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
4.9	97.3	GSM143507	Thatcher_Lr34 (resistant), rust inoculated distal leaf, replication 3	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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