Co-expression analysis

Gene ID	TaAffx.78088.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At1g11820: catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds (HF=2e-1)
Module size	8 genes
NF	0.54
%ile	80.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.57	79.2	0.90	TaAffx.78088.1.S1_at	CA737721	-	-	2e-1	At1g11820	catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds	O.I.	H.G.	S.X.	Please select
0.60	81.0	0.93	TaAffx.23270.2.A1_at	CA664368	-	-	2e+1	At5g22608	unknown protein	O.I.	H.G.	S.X.	Please select
0.57	79.2	0.93	TaAffx.57127.1.S1_at	CA636127	-	-	2e-2	At5g12470	unknown protein	O.I.	H.G.	S.X.	Please select
0.52	73.7	0.91	Ta.28938.2.S1_at	CA684040	-	-	3e+0	At4g01310	ribosomal protein L5 family protein	O.I.	H.G.	S.X.	Please select
0.50	72.4	0.93	Ta.11182.1.A1_at	CK160034	-	-	2e-4	At1g68730	zinc finger (DNL type) family protein	O.I.	H.G.	S.X.	Please select
0.47	67.9	0.94	Ta.1951.2.A1_at	CA681231	-	-	2e+1	At5g55000	FIP2	O.I.	H.G.	S.X.	Please select
0.46	66.8	0.92	TaAffx.85825.1.S1_at	CA619282	-	-	4e+0	At2g28305	unknown protein	O.I.	H.G.	S.X.	Please select
0.31	42.7	0.94	Ta.974.2.S1_at	CA747351	-	-	5e+0	At3g28956	catalytic/ nucleotide binding	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
10.6	99.2	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
4.8	97.2	GSM111233	genotype H8 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
4.1	96.4	GSM315203	target strand labeled: Antisense - rep1	GSE12528	Wheat "Chinese Spring" natural antisense transcription survey
4.1	96.4	GSM139914	Anther pre-meiosis rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.9	96.1	GSM314260	tissue type: seedling, root - rep1	GSE12508	Transcription patterns during wheat development
3.7	95.8	GSM139928	Anther immature pollen rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.6	95.6	GSM298068	Leaf tissue of Paragon at 5 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
3.3	95.0	GSM139917	Anther leptotene-pachytene rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.2	94.8	GSM139929	Anther immature pollen rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.1	94.5	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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