Co-expression analysis

Gene ID TaAffx.77699.1.S1_at
Gene name
Homology with ArabidopsisSimilar to Atmg01310: - (HF=1e+1)
Module size 6 genes
NF 0.02
%ile 5.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.20.77TaAffx.77699.1.S1_atCA743957--1e+1Atmg01310-O.I.H.G.S.X.
0.1011.30.91TaAffx.13285.1.S1_atBG910034--3e+0At5g62210embryo-specific protein-relatedO.I.H.G.S.X.
0.067.60.93Ta.19063.1.S1_atCA646746--4e+0At5g23290PDF5 (PREFOLDIN 5)O.I.H.G.S.X.
0.045.80.90TaAffx.85981.2.S1_atCA625845--1e-56At1g75630AVA-P4O.I.H.G.S.X.
0.012.40.92TaAffx.58227.1.S1_atCA621342--1e+0At5g52160protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinO.I.H.G.S.X.
0.012.40.91Ta.6893.1.A1_atBQ807133--4e-1At4g31800WRKY18O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
14.999.5GSM250895Tc_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
12.499.4GSM343688Wheat var. Kennedy_Fp inoculated_rep3GSE13660Gene expression analysis of the wheat response to infection by Fusarium pseudograminearumLink to GEO
10.499.2GSM343686Wheat var. Kennedy_Fp inoculated_rep1GSE13660Gene expression analysis of the wheat response to infection by Fusarium pseudograminearumLink to GEO
9.999.1GSM343685Wheat var. Kennedy_control_rep3GSE13660Gene expression analysis of the wheat response to infection by Fusarium pseudograminearumLink to GEO
8.398.8GSM343687Wheat var. Kennedy_Fp inoculated_rep2GSE13660Gene expression analysis of the wheat response to infection by Fusarium pseudograminearumLink to GEO
7.098.5GSM250899TcLr34_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
6.898.4GSM343682Wheat var. Kennedy_control_rep2GSE13660Gene expression analysis of the wheat response to infection by Fusarium pseudograminearumLink to GEO
6.298.1GSM343678Wheat var. Kennedy_control_rep1GSE13660Gene expression analysis of the wheat response to infection by Fusarium pseudograminearumLink to GEO
4.997.3GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.997.3GSM298067Leaf tissue of Paragon at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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