Co-expression analysis

Gene ID TaAffx.75697.1.A1_x_at
Gene name
Homology with ArabidopsisSimilar to At1g77690: LAX3 (LIKE AUX1 3) (HF=2e-5)
Module size 6 genes
NF 0.07
%ile 16.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.20.87TaAffx.75697.1.A1_x_atBJ242278--2e-5At1g77690LAX3 (LIKE AUX1 3)O.I.H.G.S.X.
0.1618.20.96Ta.1960.1.S1_atBG604531--9e-15At1g73350unknown proteinO.I.H.G.S.X.
0.1314.60.97Ta.13421.1.S1_a_atCA651502--7e-1At1g04230unknown proteinO.I.H.G.S.X.
0.1011.30.96Ta.7378.19.S1_x_atCN010931--4e-11At1g07790HTB1O.I.H.G.S.X.
0.045.80.97Ta.9652.1.S1_atBJ230637--7e-10At4g31790diphthine synthase, putative (DPH5)O.I.H.G.S.X.
0.023.60.97Ta.28809.1.S1_x_atBJ249389--2e-5At3g55460SCL30O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
6.798.4GSM138154genotype H5 developing seed at 5 days after anthesis, biological rep1GSE5939Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB locationLink to GEO
5.998.0GSM298072Crown tissue of Paragon at 3 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
4.697.0GSM298061Crown tissue of Harnesk at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
4.697.0GSM298074Crown tissue of Paragon at 5 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
4.596.9GSM314269tissue type: immature inflorescence - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
4.496.8GSM138157genotype DH91 developing seed at 5 days after anthesis, biological rep3GSE5939Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB locationLink to GEO
4.396.7GSM298062Crown tissue of Harnesk at 5 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
4.296.6GSM314270tissue type: immature inflorescence - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
4.196.4GSM138162genotype E5 developing seed at 5 days after anthesis, biological rep1GSE5939Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB locationLink to GEO
4.196.4GSM298060Crown tissue of Harnesk at 3 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



Back to the CoP portal site

Back to the KAGIANA project homepage