Co-expression analysis

Gene ID TaAffx.73323.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At5g45870: Bet v I allergen family protein (HF=3e+0)
Module size 6 genes
NF 0.63
%ile 88.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.20.96TaAffx.73323.1.S1_atCA713945--3e+0At5g45870Bet v I allergen family proteinO.I.H.G.S.X.
0.6786.30.97TaAffx.78517.1.S1_atCA731451--4e+0At2g25720unknown proteinO.I.H.G.S.X.
0.6081.00.96Ta.30411.1.S1_atCK209297--5e+0At5g62280unknown proteinO.I.H.G.S.X.
0.5072.40.96TaAffx.118620.1.S1_atBJ316617--1e+0At2g31560unknown proteinO.I.H.G.S.X.
0.4767.90.95TaAffx.115939.2.S1_atCA677586--7e-2At1g30800-O.I.H.G.S.X.
0.4362.20.96TaAffx.77881.1.S1_atCA741326--2e+1Atcg00065-O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
12.599.4GSM314277tissue type: pistil, before anthesis - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
12.199.4GSM314276tissue type: pistil, before anthesis - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
11.399.3GSM314275tissue type: pistil, before anthesis - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
7.598.6GSM298067Leaf tissue of Paragon at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
6.998.4GSM298090Leaf tissue of Solstice at 5 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO
6.798.4GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.396.7GSM250897TcLr1_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.296.6GSM343688Wheat var. Kennedy_Fp inoculated_rep3GSE13660Gene expression analysis of the wheat response to infection by Fusarium pseudograminearumLink to GEO
4.196.4GSM250895Tc_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.196.4GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO

Inter-species module comparison

A co-expression module including the soybean gene, PsAffx.CL1861Contig1_at, orthologous to the query gene, TaAffx.73323.1.S1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.9198.6PsAffx.CL1861Contig1_atAt5g45870--8e-1At1g04445zinc finger (C2H2 type) family proteinO.I.H.G.S.X.
0.5071.7PsAffx.CL288Contig1_atAt5g45870--2e+0At1g15360SHN1 (SHINE 1)O.I.H.G.S.X.
0.4463.3PsAffx.C169000039_atAt5g45870--8e+0At5g20270HHP1 (HEPTAHELICAL TRANSMEMBRANE PROTEIN1)O.I.H.G.S.X.
0.1721.2PsAffx.C51000021_s_atAt5g45870--7e-1At2g17920nucleic acid binding / zinc ion bindingO.I.H.G.S.X.
0.0811.0PsAffx.CL289Contig1_atAt5g45870--2e+0At3g48880F-box family proteinO.I.H.G.S.X.
0.0710.2GmaAffx.39956.1.A1_s_atAt5g45870--1e+1At3g44100MD-2-related lipid recognition domain-containing protein / ML domain-containing proteinO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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