Co-expression analysis

Gene ID	TaAffx.72723.1.S1_s_at
Gene name
Homology with Arabidopsis	Similar to At5g56170: - (HF=7e+0)
Module size	6 genes
NF	0.63
%ile	88.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.57	79.2	0.94	TaAffx.72723.1.S1_s_at	BE427906	-	-	7e+0	At5g56170	-	O.I.	H.G.	S.X.	Please select
0.71	88.0	0.92	TaAffx.72723.1.S1_at	BE427906	-	-	7e+0	At5g56170	-	O.I.	H.G.	S.X.	Please select
0.63	83.1	0.92	Ta.30680.2.S1_a_at	BJ219073	-	-	2e-2	At2g40670	ARR16 (ARABIDOPSIS RESPONSE REGULATOR 16)	O.I.	H.G.	S.X.	Please select
0.60	81.0	0.93	Ta.25992.1.S1_at	CK206968	-	-	6e-44	At5g06600	UBP12 (UBIQUITIN-SPECIFIC PROTEASE 12)	O.I.	H.G.	S.X.	Please select
0.50	72.4	0.94	TaAffx.50236.1.S1_at	CA744089	-	-	1e+0	At4g21020	late embryogenesis abundant domain-containing protein / LEA domain-containing protein	O.I.	H.G.	S.X.	Please select
0.36	51.9	0.93	Ta.9034.3.A1_at	BJ230516	-	-	2e+1	At5g59880	ADF3 (ACTIN DEPOLYMERIZING FACTOR 3)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
16.4	99.6	GSM314278	tissue type: anthers, before anthesis - rep1	GSE12508	Transcription patterns during wheat development
15.2	99.6	GSM314280	tissue type: anthers, before anthesis - rep3	GSE12508	Transcription patterns during wheat development
12.7	99.4	GSM314279	tissue type: anthers, before anthesis - rep2	GSE12508	Transcription patterns during wheat development
9.5	99.1	GSM298067	Leaf tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
7.4	98.6	GSM139932	Anther mature anthers rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
6.3	98.2	GSM139931	Anther maturea nthers rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
5.1	97.5	GSM111233	genotype H8 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
5.0	97.4	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.0	97.4	GSM139933	Anther mature anthers rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.5	96.9	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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