Co-expression analysis

Gene ID TaAffx.72471.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At2g27940: zinc finger (C3HC4-type RING finger) family protein (HF=1e+0)
Module size 10 genes
NF 0.63
%ile 87.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7087.20.90TaAffx.72471.1.S1_atCA725188--1e+0At2g27940zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.7489.40.93TaAffx.78823.1.S1_atCA726815--4e+0At5g26840unknown proteinO.I.H.G.S.X.
0.7087.20.91TaAffx.52385.1.S1_atCA708316--4e+0At1g05930DNA bindingO.I.H.G.S.X.
0.6786.30.90Ta.25810.1.A1_atCD374040--1e+0At5g10310unknown proteinO.I.H.G.S.X.
0.6786.30.92Ta.7698.3.S1_atCA636022--2e+1At5g60615-O.I.H.G.S.X.
0.6483.60.91Ta.17218.1.S1_atCA618872--2e+1At5g08260scpl35 (serine carboxypeptidase-like 35)O.I.H.G.S.X.
0.6182.00.91Ta.24307.1.A1_atAL822297cytokinin dehydrogenase-1e+0At2g03570unknown proteinO.I.H.G.S.X.
0.5072.40.92TaAffx.52324.1.S1_atCA709316--1e+0At2g21220auxin-responsive protein, putativeO.I.H.G.S.X.
0.4767.90.91TaAffx.113686.2.S1_atCA607016--2e+1At3g56130biotin/lipoyl attachment domain-containing proteinO.I.H.G.S.X.
0.4565.20.91TaAffx.55852.1.S1_atCA660360--6e-1At1g70895CLE17 (CLAVATA3/ESR-RELATED 17)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
9.699.1GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
8.498.9GSM298092Crown tissue of Solstice at 3 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO
7.798.7GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
7.598.6GSM298070Leaf tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
7.098.5GSM314289tissue type: 22 DAP endosperm - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
6.998.4GSM314288tissue type: 22 DAP endosperm - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
6.098.0GSM250899TcLr34_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
5.097.4GSM314287tissue type: 22 DAP endosperm - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
4.096.3GSM111233genotype H8 developing seed at 5 days after anthesis, biological rep2GSE4935wheat expression level polymorphism study 39 genotypes 2 biological repsLink to GEO
3.795.8GSM298067Leaf tissue of Paragon at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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