Co-expression analysis

Gene ID	TaAffx.71607.1.A1_at
Gene name
Homology with Arabidopsis	Similar to At3g14670: unknown protein (HF=2e+1)
Module size	6 genes
NF	0.61
%ile	87.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.2	0.97	TaAffx.71607.1.A1_at	CK208297	-	-	2e+1	At3g14670	unknown protein	O.I.	H.G.	S.X.	Please select
0.67	86.3	0.97	Ta.12753.1.S1_at	CD926424	-	-	5e+0	At1g18130	tRNA synthetase-related / tRNA ligase-related	O.I.	H.G.	S.X.	Please select
0.53	74.9	0.96	Ta.9925.2.S1_at	BJ234804	-	-	7e-1	At5g42232	-	O.I.	H.G.	S.X.	Please select
0.50	72.4	0.97	Ta.28368.2.S1_at	CB307729	Type 1 non specific lipid transfer protein precursor	-	2e+0	At4g22250	zinc finger (C3HC4-type RING finger) family protein	O.I.	H.G.	S.X.	Please select
0.46	66.8	0.97	Ta.6416.1.S1_at	CK154083	-	-	5e-15	At2g38110	GPAT6 (GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE 6)	O.I.	H.G.	S.X.	Please select
0.44	64.5	0.97	Ta.21957.1.S1_at	CK212193	-	-	6e+0	At2g21185	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.0	94.3	GSM324486	Si- B- rep3	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
2.5	92.5	GSM324485	Si- B- rep2	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
2.3	91.5	GSM324493	Si+ B+ rep1	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
2.3	91.5	GSM324484	Si- B- rep1	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
2.2	91.0	GSM139914	Anther pre-meiosis rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
2.1	90.3	GSM143504	Thatcher_Lr34 (resistant), rust inoculated basal leaf, replication 3	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
2.1	90.3	GSM250901	Tc_7dpi_mock_rep1	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
2.1	90.3	GSM143502	Thatcher_Lr34 (resistant), rust inoculated basal leaf, replication 1	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
2.0	89.7	GSM143523	Thatcher_Lr34 (susceptible), mock inoculated basal leaf, replication 3	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
2.0	89.7	GSM250903	TcLr1_7dpi_mock_rep1	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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