Co-expression analysis

Gene ID	TaAffx.70203.1.S1_s_at
Gene name
Homology with Arabidopsis	Similar to At4g18620: - (HF=9e-1)
Module size	6 genes
NF	0.75
%ile	95.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.2	0.90	TaAffx.70203.1.S1_s_at	CA628525	-	-	9e-1	At4g18620	-	O.I.	H.G.	S.X.	Please select
0.80	92.2	0.91	TaAffx.105882.1.S1_at	CA728554	-	-	1e-3	At5g18430	GDSL-motif lipase/hydrolase family protein	O.I.	H.G.	S.X.	Please select
0.71	88.0	0.88	TaAffx.15436.1.S1_at	BQ169083	-	-	4e+0	At1g34350	unknown protein	O.I.	H.G.	S.X.	Please select
0.67	86.3	0.91	TaAffx.78378.1.S1_at	CA733384	-	-	2e+1	At5g17710	EMB1241 (embryo defective 1241)	O.I.	H.G.	S.X.	Please select
0.53	74.9	0.90	Ta.12852.2.S1_at	CA650737	-	-	5e-1	At1g71697	ATCK1 (CHOLINE KINASE 1)	O.I.	H.G.	S.X.	Please select
0.50	72.4	0.88	Ta.22402.1.S1_at	CD454320	-	-	2e+0	At1g53635	unknown protein	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
9.9	99.1	GSM298082	Leaf tissue of Solstice at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
8.1	98.8	GSM298081	Leaf tissue of Solstice at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
6.6	98.3	GSM139928	Anther immature pollen rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
6.3	98.2	GSM314277	tissue type: pistil, before anthesis - rep3	GSE12508	Transcription patterns during wheat development
5.5	97.8	GSM143499	Jupateco_Lr34 (susceptible), mock inoculated distal leaf, replication 1	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
5.1	97.5	GSM314276	tissue type: pistil, before anthesis - rep2	GSE12508	Transcription patterns during wheat development
4.8	97.2	GSM343688	Wheat var. Kennedy_Fp inoculated_rep3	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
4.6	97.0	GSM314275	tissue type: pistil, before anthesis - rep1	GSE12508	Transcription patterns during wheat development
4.5	96.9	GSM343687	Wheat var. Kennedy_Fp inoculated_rep2	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
4.5	96.9	GSM343685	Wheat var. Kennedy_control_rep3	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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