Co-expression analysis

Gene ID	TaAffx.69777.1.A1_at
Gene name
Homology with Arabidopsis	Similar to At2g43570: chitinase, putative (HF=1e-4)
Module size	8 genes
NF	0.23
%ile	38.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.93	98.7	0.81	TaAffx.69777.1.A1_at	J02961.1	-	-	1e-4	At2g43570	chitinase, putative	O.I.	H.G.	S.X.	Please select
0.33	46.9	0.92	TaAffx.11741.1.S1_at	CA736632	-	-	2e+0	At3g01175	-	O.I.	H.G.	S.X.	Please select
0.31	42.7	0.86	Ta.3649.3.S1_at	CA739573	-	-	3e-4	At1g16350	inosine-5'-monophosphate dehydrogenase, putative	O.I.	H.G.	S.X.	Please select
0.31	42.7	0.92	Ta.14369.1.A1_at	CK153946	-	-	7e-99	At1g08360	60S ribosomal protein L10A (RPL10aA)	O.I.	H.G.	S.X.	Please select
0.22	27.1	0.93	Ta.24981.1.S1_at	CA740068	40S ribosomal protein S9	-	2e-6	At5g39850	40S ribosomal protein S9 (RPS9C)	O.I.	H.G.	S.X.	Please select
0.15	17.1	0.90	Ta.9304.2.S1_a_at	CA744381	-	-	9e-2	At5g63460	SAP domain-containing protein	O.I.	H.G.	S.X.	Please select
0.15	17.1	0.89	Ta.9069.3.A1_at	CA736508	-	-	1e-12	At2g46230	-	O.I.	H.G.	S.X.	Please select
0.07	8.6	0.89	TaAffx.128418.24.S1_at	BJ315237	-	-	2e+0	At5g35520	MIS12 (MINICHROMOSOME INSTABILITY 12 (MIS12)-LIKE)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
19.0	99.7	GSM314288	tissue type: 22 DAP endosperm - rep2	GSE12508	Transcription patterns during wheat development
16.6	99.6	GSM314287	tissue type: 22 DAP endosperm - rep1	GSE12508	Transcription patterns during wheat development
16.3	99.6	GSM314289	tissue type: 22 DAP endosperm - rep3	GSE12508	Transcription patterns during wheat development
15.7	99.6	GSM314284	tissue type: 22 DAP embryo - rep1	GSE12508	Transcription patterns during wheat development
15.5	99.6	GSM314285	tissue type: 22 DAP embryo - rep2	GSE12508	Transcription patterns during wheat development
14.5	99.5	GSM314286	tissue type: 22 DAP embryo - rep3	GSE12508	Transcription patterns during wheat development
6.4	98.2	GSM139914	Anther pre-meiosis rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.8	96.0	GSM139920	Anther diplotene-anaphaseI rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.7	95.8	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.6	95.6	GSM139922	Anther telophaseI-telophaseII rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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