Co-expression analysis

Gene ID	TaAffx.65308.1.A1_s_at
Gene name
Homology with Arabidopsis	Similar to At1g72820: mitochondrial substrate carrier family protein (HF=6e-1)
Module size	6 genes
NF	0.28
%ile	45.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.39	56.1	0.97	TaAffx.65308.1.A1_s_at	BJ251595	-	-	6e-1	At1g72820	mitochondrial substrate carrier family protein	O.I.	H.G.	S.X.	Please select
0.67	86.3	0.97	Ta.4820.2.S1_at	BJ267422	-	-	4e+0	At5g62780	DNAJ heat shock N-terminal domain-containing protein	O.I.	H.G.	S.X.	Please select
0.47	67.9	0.97	Ta.3478.2.S1_x_at	CA648423	-	-	9e-20	At1g26830	ATCUL3 (ARABIDOPSIS THALIANA CULLIN 3)	O.I.	H.G.	S.X.	Please select
0.23	29.0	0.97	Ta.9442.3.S1_a_at	CA710901	-	-	2e-1	At4g26965	NADH:ubiquinone oxidoreductase family protein	O.I.	H.G.	S.X.	Please select
0.12	13.3	0.97	Ta.7569.1.S1_at	BJ308274	-	-	2e-17	At1g43190	polypyrimidine tract-binding protein, putative / heterogeneous nuclear ribonucleoprotein, putative	O.I.	H.G.	S.X.	Please select
0.11	12.4	0.98	Ta.27789.1.S1_x_at	CD920668	-	-	9e-35	At1g09640	elongation factor 1B-gamma, putative / eEF-1B gamma, putative	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.0	96.3	GSM314269	tissue type: immature inflorescence - rep1	GSE12508	Transcription patterns during wheat development
3.8	96.0	GSM314270	tissue type: immature inflorescence - rep2	GSE12508	Transcription patterns during wheat development
3.4	95.2	GSM143521	Thatcher_Lr34 (susceptible), mock inoculated basal leaf, replication 1	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
3.3	95.0	GSM138169	genotype B68 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
3.0	94.3	GSM314275	tissue type: pistil, before anthesis - rep1	GSE12508	Transcription patterns during wheat development
3.0	94.3	GSM298064	Crown tissue of Harnesk at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
2.9	94.0	GSM138154	genotype H5 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
2.9	94.0	GSM143508	Thatcher_Lr34 (resistant), mock inoculated basal leaf, replication 1	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
2.9	94.0	GSM314271	tissue type: immature inflorescence - rep3	GSE12508	Transcription patterns during wheat development
2.6	92.9	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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