Co-expression analysis

Gene ID TaAffx.65130.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At5g02470: DPA (HF=7e-2)
Module size 9 genes
NF 0.22
%ile 37.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9498.90.83TaAffx.65130.1.S1_atBJ259878--7e-2At5g02470DPAO.I.H.G.S.X.
0.2735.60.95TaAffx.38222.1.S1_atBJ250070--5e+0At4g20900MS5 (MALE-STERILE 5)O.I.H.G.S.X.
0.1922.40.94Ta.704.1.A1_atBJ275739--2e-3At4g18710BIN2 (BRASSINOSTEROID-INSENSITIVE 2)O.I.H.G.S.X.
0.1821.00.94Ta.704.2.S1_atBE515686--4e-30At5g26751ATSK11O.I.H.G.S.X.
0.1821.00.94TaAffx.106257.1.S1_atBE493730--4e-8At4g21060galactosyltransferase family proteinO.I.H.G.S.X.
0.1719.80.94Ta.21894.1.S1_atCA706899--2e+0At2g27080harpin-induced protein-related / HIN1-related / harpin-responsive protein-relatedO.I.H.G.S.X.
0.1719.80.94Ta.9204.1.S1_s_atBQ170138--9e+0At4g30670unknown proteinO.I.H.G.S.X.
0.1517.10.90Ta.16727.1.S1_atCA611670--2e+0At2g42260UVI4 (UV-B-INSENSITIVE 4)O.I.H.G.S.X.
0.0910.40.94Ta.9204.1.S1_atBQ170138--9e+0At4g30670unknown proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
17.699.7GSM314280tissue type: anthers, before anthesis - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
17.599.7GSM314279tissue type: anthers, before anthesis - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
15.899.6GSM314278tissue type: anthers, before anthesis - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
11.399.3GSM298092Crown tissue of Solstice at 3 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO
10.099.1GSM139931Anther maturea nthers rep1GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
7.298.5GSM139932Anther mature anthers rep2GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
6.598.3GSM139933Anther mature anthers rep3GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
6.198.1GSM314252tissue type: germinating seed, coleoptile - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
4.396.7GSM111209genotype F36 developing seed at 5 days after anthesis, biological rep2GSE4935wheat expression level polymorphism study 39 genotypes 2 biological repsLink to GEO
3.996.1GSM298064Crown tissue of Harnesk at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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