Co-expression analysis

Gene ID	TaAffx.64816.1.A1_at
Gene name
Homology with Arabidopsis	Similar to At2g33800: ribosomal protein S5 family protein (HF=4e+0)
Module size	6 genes
NF	0.56
%ile	81.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.59	79.8	0.89	TaAffx.64816.1.A1_at	BJ274338	-	-	4e+0	At2g33800	ribosomal protein S5 family protein	O.I.	H.G.	S.X.	Please select
0.80	92.2	0.91	Ta.28109.1.A1_at	CA617283	-	-	8e-2	At4g23430	short-chain dehydrogenase/reductase (SDR) family protein	O.I.	H.G.	S.X.	Please select
0.73	89.1	0.90	Ta.4018.1.S1_at	CD888469	-	-	7e-4	At2g37540	short-chain dehydrogenase/reductase (SDR) family protein	O.I.	H.G.	S.X.	Please select
0.60	81.0	0.91	Ta.12323.1.A1_at	BQ172096	-	-	6e+0	Atcg00050	-	O.I.	H.G.	S.X.	Please select
0.27	35.6	0.91	Ta.4702.2.S1_at	BJ270807	-	-	2e-4	At5g49820	emb1879 (embryo defective 1879)	O.I.	H.G.	S.X.	Please select
0.27	35.6	0.92	AFFX-Tae-r2-Bs-lys-5_at	AFFX-Tae-r2-Bs-lys-5	-	-			-	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
5.3	97.6	GSM139928	Anther immature pollen rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
5.2	97.5	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.8	97.2	GSM250899	TcLr34_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.1	96.4	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.6	95.6	GSM298076	Crown tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
3.4	95.2	GSM250896	Tc_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.0	94.3	GSM314284	tissue type: 22 DAP embryo - rep1	GSE12508	Transcription patterns during wheat development
3.0	94.3	GSM111185	genotype C22 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
3.0	94.3	GSM298087	Crown tissue of Solstice at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
2.9	94.0	GSM314286	tissue type: 22 DAP embryo - rep3	GSE12508	Transcription patterns during wheat development

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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