Co-expression analysis

Gene ID	TaAffx.64664.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At3g60660: unknown protein (HF=1e+0)
Module size	6 genes
NF	0.47
%ile	73.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.43	62.2	0.84	TaAffx.64664.1.S1_at	BJ282283	-	-	1e+0	At3g60660	unknown protein	O.I.	H.G.	S.X.	Please select
0.67	86.3	0.85	Ta.28488.1.S1_at	CK205419	-	-	6e+0	At3g10990	F-box family protein	O.I.	H.G.	S.X.	Please select
0.67	86.3	0.87	Ta.1574.1.S1_s_at	BQ744318	-	-	6e+0	At4g27780	ACBP2 (ACYL-COA BINDING PROTEIN ACBP 2)	O.I.	H.G.	S.X.	Please select
0.50	72.4	0.87	TaAffx.6284.1.S1_at	CA688900	-	-	3e+0	At3g62528	unknown protein	O.I.	H.G.	S.X.	Please select
0.40	58.4	0.87	Ta.22548.1.S1_a_at	CA684451	Zinc transporter-like	-	1e-4	At4g33020	ZIP9	O.I.	H.G.	S.X.	Please select
0.30	40.9	0.85	Ta.30640.1.S1_at	CD861747	-	-	2e+0	At4g20370	TSF (TWIN SISTER OF FT)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
58.5	99.9	GSM315203	target strand labeled: Antisense - rep1	GSE12528	Wheat "Chinese Spring" natural antisense transcription survey
16.1	99.6	GSM314262	tissue type: seedling, root - rep3	GSE12508	Transcription patterns during wheat development
12.4	99.4	GSM314261	tissue type: seedling, root - rep2	GSE12508	Transcription patterns during wheat development
11.9	99.4	GSM314260	tissue type: seedling, root - rep1	GSE12508	Transcription patterns during wheat development
11.8	99.3	GSM314254	tissue type: germinating seed, root - rep1	GSE12508	Transcription patterns during wheat development
5.6	97.8	GSM314255	tissue type: germinating seed, root - rep2	GSE12508	Transcription patterns during wheat development
4.9	97.3	GSM314275	tissue type: pistil, before anthesis - rep1	GSE12508	Transcription patterns during wheat development
4.5	96.9	GSM314277	tissue type: pistil, before anthesis - rep3	GSE12508	Transcription patterns during wheat development
4.2	96.6	GSM314256	tissue type: germinating seed, root - rep3	GSE12508	Transcription patterns during wheat development
4.0	96.3	GSM143500	Jupateco_Lr34 (susceptible), mock inoculated distal leaf, replication 2	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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