Co-expression analysis

Gene ID TaAffx.59789.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At3g13560: glycosyl hydrolase family 17 protein (HF=3e-13)
Module size 6 genes
NF 0.38
%ile 60.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5979.80.96TaAffx.59789.1.S1_atCA595294--3e-13At3g13560glycosyl hydrolase family 17 proteinO.I.H.G.S.X.
0.4464.50.96TaAffx.51245.1.S1_atCA612442--6e-6At5g65810unknown proteinO.I.H.G.S.X.
0.3549.80.96TaAffx.58965.1.S1_atBJ211727--1e-6At5g25510serine/threonine protein phosphatase 2A (PP2A) regulatory subunit B', putativeO.I.H.G.S.X.
0.2939.20.96TaAffx.134061.1.S1_atBQ607083--1e-3At3g13560glycosyl hydrolase family 17 proteinO.I.H.G.S.X.
0.2633.60.96Ta.10108.3.S1_a_atBJ307443--2e-8At2g35155catalyticO.I.H.G.S.X.
0.2532.10.97Ta.9422.2.S1_a_atCA646771--5e-29At1g06390GSK1 (GSK3/SHAGGY-LIKE PROTEIN KINASE 1)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.897.2GSM143517Thatcher_Lr34 (susceptible), rust inoculated basal leaf, replication 3GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halvesLink to GEO
4.797.1GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
3.495.2GSM250899TcLr34_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
3.495.2GSM143515Thatcher_Lr34 (susceptible), rust inoculated basal leaf, replication 1GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halvesLink to GEO
3.495.2GSM138153genotype G32 developing seed at 5 days after anthesis, biological rep3GSE5939Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB locationLink to GEO
3.395.0GSM143516Thatcher_Lr34 (susceptible), rust inoculated basal leaf, replication 2GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halvesLink to GEO
3.094.3GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
3.094.3GSM250896Tc_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
2.893.6GSM138203genotype F44 developing seed at 5 days after anthesis, biological rep3GSE5939Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB locationLink to GEO
2.893.6GSM143502Thatcher_Lr34 (resistant), rust inoculated basal leaf, replication 1GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halvesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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