Co-expression analysis

Gene ID TaAffx.59591.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At3g28020: - (HF=1e+0)
Module size 6 genes
NF 0.02
%ile 7.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.20.65TaAffx.59591.1.S1_atCA598382--1e+0At3g28020-O.I.H.G.S.X.
0.078.60.90TaAffx.108475.1.S1_atCA687930--4e+0At1g62981unknown proteinO.I.H.G.S.X.
0.056.70.85TaAffx.30857.1.S1_atCA621554--3e+0At5g21010ATBPM5 (BTB-POZ and MATH domain 5)O.I.H.G.S.X.
0.045.80.84TaAffx.106563.2.S1_atCA690184--1e+1At4g19100unknown proteinO.I.H.G.S.X.
0.034.70.87TaAffx.105718.1.S1_atCA730771--5e-5At1g71130AP2 domain-containing transcription factor, putativeO.I.H.G.S.X.
-0.70.87Ta.4760.2.S1_atCA621247--1e+0At1g26210unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
5.998.0GSM111233genotype H8 developing seed at 5 days after anthesis, biological rep2GSE4935wheat expression level polymorphism study 39 genotypes 2 biological repsLink to GEO
5.797.9GSM111229genotype B65 developing seed at 5 days after anthesis, biological rep2GSE4935wheat expression level polymorphism study 39 genotypes 2 biological repsLink to GEO
5.397.6GSM111174genotype G30 developing seed at 5 days after anthesis, biological rep1GSE4935wheat expression level polymorphism study 39 genotypes 2 biological repsLink to GEO
4.997.3GSM314279tissue type: anthers, before anthesis - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
4.096.3GSM250899TcLr34_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
3.996.1GSM298070Leaf tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
3.896.0GSM111237genotype F38b developing seed at 5 days after anthesis, biological rep2GSE4935wheat expression level polymorphism study 39 genotypes 2 biological repsLink to GEO
3.695.6GSM111181genotype C31 developing seed at 5 days after anthesis, biological rep2GSE4935wheat expression level polymorphism study 39 genotypes 2 biological repsLink to GEO
3.595.4GSM298069Leaf tissue of Paragon at 9 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
3.395.0GSM111220genotype H23 developing seed at 5 days after anthesis, biological rep1GSE4935wheat expression level polymorphism study 39 genotypes 2 biological repsLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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