Co-expression analysis

Gene ID TaAffx.594.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At3g19010: oxidoreductase, 2OG-Fe(II) oxygenase family protein (HF=1e+0)
Module size 6 genes
NF 0.19
%ile 33.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7389.10.92TaAffx.594.1.S1_atBQ169006--1e+0At3g19010oxidoreductase, 2OG-Fe(II) oxygenase family proteinO.I.H.G.S.X.
0.4058.40.95Ta.4063.3.S1_s_atCA732547--8e-1At5g66570PSBO1 (PS II OXYGEN-EVOLVING COMPLEX 1)O.I.H.G.S.X.
0.3651.90.95Ta.17435.1.S1_atCA620845--7e+0At4g22210LCR85 (Low-molecular-weight cysteine-rich 85)O.I.H.G.S.X.
0.2329.00.92TaAffx.113206.1.S1_atCA617248--3e+0At5g28919-O.I.H.G.S.X.
0.1011.30.93TaAffx.55874.1.S1_atCA660028--1e+1At4g32680unknown proteinO.I.H.G.S.X.
0.078.60.94TaAffx.31791.1.S1_atCA607567--7e-1At5g26717-O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
12.799.4GSM298070Leaf tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
10.099.1GSM298067Leaf tissue of Paragon at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
9.199.0GSM111233genotype H8 developing seed at 5 days after anthesis, biological rep2GSE4935wheat expression level polymorphism study 39 genotypes 2 biological repsLink to GEO
8.898.9GSM298092Crown tissue of Solstice at 3 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO
6.798.4GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
5.297.5GSM298069Leaf tissue of Paragon at 9 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
4.296.6GSM298090Leaf tissue of Solstice at 5 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO
3.896.0GSM343688Wheat var. Kennedy_Fp inoculated_rep3GSE13660Gene expression analysis of the wheat response to infection by Fusarium pseudograminearumLink to GEO
3.795.8GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
3.194.5GSM343682Wheat var. Kennedy_control_rep2GSE13660Gene expression analysis of the wheat response to infection by Fusarium pseudograminearumLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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