Co-expression analysis

Gene ID	TaAffx.58753.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At3g44540: FAR4 (FATTY ACID REDUCTASE 4) (HF=1e-1)
Module size	6 genes
NF	0.10
%ile	22.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.2	0.81	TaAffx.58753.1.S1_at	CA618016	-	-	1e-1	At3g44540	FAR4 (FATTY ACID REDUCTASE 4)	O.I.	H.G.	S.X.	Please select
0.33	46.9	0.93	TaAffx.16626.3.S1_at	CA697619	-	-	2e-2	At2g10602	unknown protein	O.I.	H.G.	S.X.	Please select
0.25	32.1	0.94	TaAffx.111590.1.S1_at	CA637180	-	-	1e+0	At1g01990	-	O.I.	H.G.	S.X.	Please select
0.20	24.0	0.94	TaAffx.8774.1.S1_at	CA620394	-	-	1e+1	At5g14130	peroxidase, putative	O.I.	H.G.	S.X.	Please select
0.04	5.8	0.95	TaAffx.78861.1.S1_at	CA725589	-	-	1e+1	At3g28070	nodulin MtN21 family protein	O.I.	H.G.	S.X.	Please select
0.03	4.7	0.93	TaAffx.4913.1.S1_at	CA728728	-	-	2e+1	At5g67060	HEC1 (HECATE 1)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
23.6	99.8	GSM314261	tissue type: seedling, root - rep2	GSE12508	Transcription patterns during wheat development
13.9	99.5	GSM314262	tissue type: seedling, root - rep3	GSE12508	Transcription patterns during wheat development
11.0	99.3	GSM139928	Anther immature pollen rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
9.9	99.1	GSM314254	tissue type: germinating seed, root - rep1	GSE12508	Transcription patterns during wheat development
6.2	98.1	GSM139930	Anther immature pollen rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
6.2	98.1	GSM314255	tissue type: germinating seed, root - rep2	GSE12508	Transcription patterns during wheat development
5.5	97.8	GSM139927	Anther tetrads rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
5.4	97.7	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
5.1	97.5	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.2	96.6	GSM298090	Leaf tissue of Solstice at 5 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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