Co-expression analysis

Gene ID TaAffx.58364.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At4g10610: CID12 (HF=2e+1)
Module size 6 genes
NF 0.57
%ile 83.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8393.40.93TaAffx.58364.1.S1_atCA620231--2e+1At4g10610CID12O.I.H.G.S.X.
0.7188.00.91TaAffx.108984.1.S1_atCA681537--4e+0At4g35070-O.I.H.G.S.X.
0.6786.30.92Ta.10440.2.S1_atBJ247141--1e+0At5g10780-O.I.H.G.S.X.
0.6081.00.92TaAffx.112188.1.S1_atCA625505--2e+1At4g38092unknown proteinO.I.H.G.S.X.
0.2735.60.91TaAffx.77845.1.S1_atCA741845--3e-1At5g67500VDAC2 (VOLTAGE DEPENDENT ANION CHANNEL 2)O.I.H.G.S.X.
0.2532.10.91Ta.19055.1.A1_atCK205684--8e-23At4g22130SRF8 (STRUBBELIG-RECEPTOR FAMILY 8)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
39.699.9GSM315203target strand labeled: Antisense - rep1GSE12528Wheat "Chinese Spring" natural antisense transcription surveyLink to GEO
8.898.9GSM298092Crown tissue of Solstice at 3 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO
6.598.3GSM298070Leaf tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
6.198.1GSM246391SB62_Stem_ rep2_at anthesisGSE9767Genotypic differences in water soluble carbohydrate metabolism in stemLink to GEO
6.098.0GSM246386SB169_Stem_ rep1_at anthesisGSE9767Genotypic differences in water soluble carbohydrate metabolism in stemLink to GEO
5.497.7GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
5.097.4GSM314260tissue type: seedling, root - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
4.997.3GSM314278tissue type: anthers, before anthesis - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
4.096.3GSM298067Leaf tissue of Paragon at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
3.996.1GSM250899TcLr34_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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