Co-expression analysis

Gene ID	TaAffx.5779.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At1g35365: unknown protein (HF=1e-1)
Module size	7 genes
NF	0.45
%ile	70.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.75	89.8	0.96	TaAffx.5779.1.S1_at	BJ307256	-	-	1e-1	At1g35365	unknown protein	O.I.	H.G.	S.X.	Please select
0.55	76.8	0.97	Ta.13084.1.S1_at	CA744806	-	-	3e-1	At3g13437	unknown protein	O.I.	H.G.	S.X.	Please select
0.44	64.5	0.97	Ta.11963.1.A1_at	BQ171171	-	-	4e+0	At5g60200	Dof-type zinc finger domain-containing protein	O.I.	H.G.	S.X.	Please select
0.44	64.5	0.97	Ta.19632.1.S1_at	BT009194.1	-	-	2e-1	At5g63060	transporter	O.I.	H.G.	S.X.	Please select
0.40	58.4	0.97	Ta.26339.2.S1_at	CD490757	-	-	2e+0	At5g36001	-	O.I.	H.G.	S.X.	Please select
0.30	40.9	0.97	Ta.10362.2.A1_a_at	BJ300127	-	-	4e+0	At4g35295	homoserine kinase, putative / HSK, putative	O.I.	H.G.	S.X.	Please select
0.24	30.3	0.97	TaAffx.21100.1.S1_at	CD885592	-	-	1e-1	At4g02790	GTP-binding family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
30.5	99.9	GSM315203	target strand labeled: Antisense - rep1	GSE12528	Wheat "Chinese Spring" natural antisense transcription survey
25.5	99.8	GSM314262	tissue type: seedling, root - rep3	GSE12508	Transcription patterns during wheat development
24.1	99.8	GSM314261	tissue type: seedling, root - rep2	GSE12508	Transcription patterns during wheat development
4.0	96.3	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
3.4	95.2	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.3	95.0	GSM250895	Tc_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.1	94.5	GSM250908	Tc_7dpi_inoculated_rep2	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.0	94.3	GSM250899	TcLr34_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
2.9	94.0	GSM298075	Crown tissue of Paragon at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
2.8	93.6	GSM298067	Leaf tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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