Co-expression analysis

Gene ID	TaAffx.57652.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At4g17310: unknown protein (HF=1e-9)
Module size	6 genes
NF	0.16
%ile	29.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.2	0.80	TaAffx.57652.1.S1_at	CA626274	-	-	1e-9	At4g17310	unknown protein	O.I.	H.G.	S.X.	Please select
0.50	72.4	0.98	Ta.14094.1.S1_at	BJ265070	-	-	2e-3	At1g17880	nascent polypeptide-associated complex (NAC) domain-containing protein / BTF3b-like transcription factor, putative	O.I.	H.G.	S.X.	Please select
0.44	64.5	0.98	Ta.11001.2.S1_a_at	CN008546	-	-	1e+0	At4g04090	speckle-type POZ protein-related	O.I.	H.G.	S.X.	Please select
0.36	51.9	0.98	Ta.25449.1.S1_s_at	CD453603	-	-	4e-5	At5g05990	mitochondrial glycoprotein family protein / MAM33 family protein	O.I.	H.G.	S.X.	Please select
0.07	8.6	0.98	Ta.1648.1.A1_a_at	CD453856	-	-	3e-11	At3g18190	chaperonin, putative	O.I.	H.G.	S.X.	Please select
0.04	5.8	0.98	Ta.14369.1.S1_at	BJ295658	-	-	7e-99	At1g08360	60S ribosomal protein L10A (RPL10aA)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
37.6	99.9	GSM315203	target strand labeled: Antisense - rep1	GSE12528	Wheat "Chinese Spring" natural antisense transcription survey
19.5	99.7	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
6.9	98.4	GSM111233	genotype H8 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
6.4	98.2	GSM298067	Leaf tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
6.3	98.2	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
4.4	96.8	GSM298069	Leaf tissue of Paragon at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
4.4	96.8	GSM138215	genotype A77 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
3.9	96.1	GSM138216	genotype H9 developing seed at 5 days after anthesis, biological rep2	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
3.8	96.0	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.7	95.8	GSM250899	TcLr34_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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