Co-expression analysis

Gene ID TaAffx.57600.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At4g12440: adenine phosphoribosyltransferase, putative (HF=2e-2)
Module size 6 genes
NF 0.00
%ile 0.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.20.73TaAffx.57600.1.S1_atCA626678--2e-2At4g12440adenine phosphoribosyltransferase, putativeO.I.H.G.S.X.
0.012.40.88TaAffx.112820.3.S1_atCA623506--4e+0At3g07920translation initiation factorO.I.H.G.S.X.
-0.70.86Ta.20889.2.S1_atCA628237--2e-1At1g11500unknown proteinO.I.H.G.S.X.
-0.70.83TaAffx.9551.1.S1_atCA595241--1e+0At2g36410unknown proteinO.I.H.G.S.X.
-0.70.83TaAffx.128414.1.A1_x_atAY328025.1ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit-0Atcg00490-O.I.H.G.S.X.
-0.70.84Ta.24976.1.S1_x_atCA659744ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit-1e-21Atcg00490-O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
9.899.1GSM298067Leaf tissue of Paragon at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
8.098.8GSM298092Crown tissue of Solstice at 3 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO
6.198.1GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.296.6GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.296.6GSM298070Leaf tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
3.695.6GSM298090Leaf tissue of Solstice at 5 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO
3.294.8GSM298064Crown tissue of Harnesk at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
3.094.3GSM250899TcLr34_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
2.893.6GSM298069Leaf tissue of Paragon at 9 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
2.793.3GSM298086Crown tissue of Solstice at 5 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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