Co-expression analysis

Gene ID	TaAffx.57326.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At1g71780: unknown protein (HF=4e+0)
Module size	15 genes
NF	0.43
%ile	67.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.63	83.1	0.80	TaAffx.57326.1.S1_at	CA631784	-	-	4e+0	At1g71780	unknown protein	O.I.	H.G.	S.X.	Please select
0.62	82.3	0.88	Ta.16101.1.S1_at	CA598926	-	-	8e+0	At4g12730	FLA2 (FASCICLIN-LIKE ARABINOGALACTAN 2)	O.I.	H.G.	S.X.	Please select
0.56	78.6	0.90	Ta.23129.1.S1_x_at	CA624439	-	-	2e+1	At2g10608	unknown protein	O.I.	H.G.	S.X.	Please select
0.54	75.5	0.88	Ta.28139.2.S1_x_at	CA635297	-	-	2e+1	At3g10460	self-incompatibility protein-related	O.I.	H.G.	S.X.	Please select
0.54	75.5	0.87	Ta.401.2.S1_x_at	CA598572	-	-	3e-1	At5g16120	hydrolase, alpha/beta fold family protein	O.I.	H.G.	S.X.	Please select
0.50	72.4	0.87	Ta.28766.2.S1_s_at	CD492036	-	-	2e-13	At4g25820	XTR9 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 9)	O.I.	H.G.	S.X.	Please select
0.47	67.9	0.87	Ta.20783.1.S1_at	CA618942	-	-	4e+0	At5g60945	-	O.I.	H.G.	S.X.	Please select
0.42	60.9	0.90	Ta.28766.3.S1_at	CA610853	-	-	5e-20	At4g25820	XTR9 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 9)	O.I.	H.G.	S.X.	Please select
0.40	58.4	0.89	Ta.25350.2.S1_a_at	CA639373	-	-	3e-1	At2g01530	MLP329 (MLP-LIKE PROTEIN 329)	O.I.	H.G.	S.X.	Please select
0.39	56.1	0.89	Ta.28868.1.S1_at	CA619500	-	-	1e+0	At1g47680	unknown protein	O.I.	H.G.	S.X.	Please select
0.38	54.7	0.89	Ta.30401.3.S1_x_at	CA599168	-	-	3e+0	At1g06980	unknown protein	O.I.	H.G.	S.X.	Please select
0.31	42.7	0.91	Ta.23400.1.S1_at	CA620631	-	-	8e-1	At3g09410	pectinacetylesterase family protein	O.I.	H.G.	S.X.	Please select
0.29	39.2	0.86	TaAffx.78902.1.S1_at	CA724983	-	-	9e-1	At5g03170	FLA11	O.I.	H.G.	S.X.	Please select
0.25	32.1	0.90	Ta.3427.2.S1_at	BE500330	-	-	7e-3	At1g14380	IQD28 (IQ67 DOMAIN PROTEIN 28)	O.I.	H.G.	S.X.	Please select
0.23	29.0	0.87	Ta.23129.1.S1_at	CA624439	-	-	2e+1	At2g10608	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
14.6	99.5	GSM343682	Wheat var. Kennedy_control_rep2	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
13.5	99.5	GSM343685	Wheat var. Kennedy_control_rep3	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
12.9	99.4	GSM343688	Wheat var. Kennedy_Fp inoculated_rep3	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
10.7	99.2	GSM343678	Wheat var. Kennedy_control_rep1	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
10.6	99.2	GSM343687	Wheat var. Kennedy_Fp inoculated_rep2	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
7.5	98.6	GSM343686	Wheat var. Kennedy_Fp inoculated_rep1	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
5.0	97.4	GSM139928	Anther immature pollen rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.5	96.9	GSM139918	Anther leptotene-pachytene rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.1	96.4	GSM139930	Anther immature pollen rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.9	96.1	GSM139917	Anther leptotene-pachytene rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

Back to the CoP portal site

Back to the KAGIANA project homepage