Co-expression analysis

Gene ID TaAffx.5718.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At5g67060: HEC1 (HECATE 1) (HF=1e+0)
Module size 42 genes
NF 0.38
%ile 61.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9899.90.90TaAffx.5718.1.S1_atCA701119--1e+0At5g67060HEC1 (HECATE 1)O.I.H.G.S.X.
0.5879.20.95TaAffx.73323.1.S1_atCA713945--3e+0At5g45870Bet v I allergen family proteinO.I.H.G.S.X.
0.5779.20.92TaAffx.9057.1.S1_atCA614446--8e-1At5g35390leucine-rich repeat transmembrane protein kinase, putativeO.I.H.G.S.X.
0.5678.60.94TaAffx.110759.1.S1_atCA654729--1e+0At4g35820oxidoreductase, 2OG-Fe(II) oxygenase family proteinO.I.H.G.S.X.
0.5374.90.94TaAffx.77881.1.S1_atCA741326--2e+1Atcg00065-O.I.H.G.S.X.
0.5173.00.94TaAffx.38815.1.A1_atBJ216899--1e+0At5g24170-O.I.H.G.S.X.
0.5173.00.93TaAffx.38453.2.S1_atBJ232174--2e+1At5g50540unknown proteinO.I.H.G.S.X.
0.5072.40.94TaAffx.38217.1.S1_atBJ244494--7e+0At5g11690ATTIM17-3O.I.H.G.S.X.
0.4969.70.95Ta.18019.2.S1_atCA625748--1e+0At1g32700zinc-binding family proteinO.I.H.G.S.X.
0.4969.70.95TaAffx.118620.1.S1_atBJ316617--1e+0At2g31560unknown proteinO.I.H.G.S.X.
0.4869.00.94Ta.6762.3.S1_atBJ246546--1e+0At5g61490-O.I.H.G.S.X.
0.4767.90.95TaAffx.51594.1.S1_atCA723204--1e+0At3g51810EM1 (LATE EMBRYOGENESIS ABUNDANT 1)O.I.H.G.S.X.
0.4767.90.95TaAffx.115939.2.S1_atCA677586--7e-2At1g30800-O.I.H.G.S.X.
0.4666.80.95Ta.30411.1.S1_atCK209297--5e+0At5g62280unknown proteinO.I.H.G.S.X.
0.4666.80.94TaAffx.64156.1.S1_atBJ313261--4e+0At5g19830aminoacyl-tRNA hydrolaseO.I.H.G.S.X.
0.4565.20.95TaAffx.6157.1.S1_atCA690748--4e+0At2g42930glycosyl hydrolase family protein 17O.I.H.G.S.X.
0.4464.50.94TaAffx.107754.1.S1_atCD876350--1e+0At2g21780unknown proteinO.I.H.G.S.X.
0.4464.50.96TaAffx.3664.1.S1_atCD876496--2e+0At2g47710universal stress protein (USP) family proteinO.I.H.G.S.X.
0.4362.20.94TaAffx.107179.1.S1_atCA704854--8e-1At3g60760unknown proteinO.I.H.G.S.X.
0.4260.90.92Ta.30413.1.S1_atCK209866--5e+0At3g49430SRp34a (Ser/Arg-rich protein 34a)O.I.H.G.S.X.
0.4260.90.95TaAffx.85941.1.S1_atCA618291--2e+1At5g23760heavy-metal-associated domain-containing proteinO.I.H.G.S.X.
0.4159.60.94TaAffx.85817.1.S1_atCA619362--4e+0At4g17800DNA-binding protein-relatedO.I.H.G.S.X.
0.4159.60.94TaAffx.111909.1.S1_atCA630666--2e+1At5g09250KIWIO.I.H.G.S.X.
0.4058.40.94TaAffx.4857.1.S1_atCA730111--4e+0At1g77682-O.I.H.G.S.X.
0.4058.40.95Ta.6759.2.S1_atBJ211299--2e+0At5g63310NDPK2 (NUCLEOSIDE DIPHOSPHATE KINASE 2)O.I.H.G.S.X.
0.3956.10.94TaAffx.78517.1.S1_atCA731451--4e+0At2g25720unknown proteinO.I.H.G.S.X.
0.3956.10.94TaAffx.118401.1.A1_atBQ170283--1e+0At2g47480unknown proteinO.I.H.G.S.X.
0.3956.10.95TaAffx.79437.1.S1_atCA715704--3e+0At1g02680TAF13 (TBP-ASSOCIATED FACTOR 13)O.I.H.G.S.X.
0.3854.70.94TaAffx.105893.1.S1_x_atCA728292--3e-1At1g74890ARR15 (RESPONSE REGULATOR 15)O.I.H.G.S.X.
0.3854.70.94TaAffx.110167.1.S1_atCA662870--4e+0At4g14440HCD1 (3-HYDROXYACYL-COA DEHYDRATASE 1)O.I.H.G.S.X.
0.3549.80.95Ta.3911.2.S1_s_atCA604151--4e+0At2g44290protease inhibitor/seed storage/lipid transfer protein (LTP) family protein (YLS3)O.I.H.G.S.X.
0.3448.10.93TaAffx.38796.1.S1_atBJ210283--2e+1At5g22650HD2B (HISTONE DEACETYLASE 2B)O.I.H.G.S.X.
0.3244.40.94TaAffx.23723.1.S1_atCA731348--2e+1At5g09445unknown proteinO.I.H.G.S.X.
0.2939.20.94Ta.5523.2.S1_a_atBJ243328--4e+0At5g47600heat shock protein-relatedO.I.H.G.S.X.
0.2939.20.94TaAffx.105893.1.S1_atCA728292--3e-1At1g74890ARR15 (RESPONSE REGULATOR 15)O.I.H.G.S.X.
0.2839.20.94TaAffx.85343.1.S1_atCA623566--4e+0At5g34828-O.I.H.G.S.X.
0.2633.60.94TaAffx.30598.1.S1_atCA623743--1e+0At3g05230signal peptidase subunit family proteinO.I.H.G.S.X.
0.2024.00.94TaAffx.26470.1.S1_atCA688638--4e+0At4g21610LOL2 (LSD ONE LIKE 2)O.I.H.G.S.X.
0.1922.40.95TaAffx.78861.1.S1_atCA725589--1e+1At3g28070nodulin MtN21 family proteinO.I.H.G.S.X.
0.1821.00.94TaAffx.31010.1.S1_atBG606650--9e+0At5g26640unknown proteinO.I.H.G.S.X.
0.1112.40.92TaAffx.93400.2.S1_atBJ260476--1e+0At2g32360ubiquitin family proteinO.I.H.G.S.X.
0.1112.40.93Ta.13520.1.A1_atBQ171983--6e+0At5g36170HCF109 (HIGH CHLOROPHYLL FLUORESCENT 109)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
9.099.0GSM324488Si- B+ rep2GSE12936Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildewLink to GEO
8.598.9GSM324487Si- B+ rep1GSE12936Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildewLink to GEO
7.598.6GSM298070Leaf tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
6.398.2GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
5.998.0GSM298067Leaf tissue of Paragon at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
4.997.3GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.697.0GSM139931Anther maturea nthers rep1GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
4.697.0GSM250895Tc_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.596.9GSM314279tissue type: anthers, before anthesis - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
4.596.9GSM314280tissue type: anthers, before anthesis - rep3GSE12508Transcription patterns during wheat developmentLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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