Co-expression analysis

Gene ID TaAffx.57044.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At1g32480: oxidoreductase/ oxidoreductase, acting on the CH-OH group of donors, NAD or NADP as acceptor (HF=1e+1)
Module size 6 genes
NF 0.10
%ile 21.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.4362.20.80TaAffx.57044.1.S1_atCA637731--1e+1At1g32480oxidoreductase/ oxidoreductase, acting on the CH-OH group of donors, NAD or NADP as acceptorO.I.H.G.S.X.
0.4464.50.82Ta.8884.1.A1_atBQ162561--3e-1At3g23680F-box family protein-relatedO.I.H.G.S.X.
0.2633.60.80Ta.9334.2.S1_atCA608488--1e+0At4g30064LCR61 (Low-molecular-weight cysteine-rich 61)O.I.H.G.S.X.
0.1719.80.80Ta.18801.1.S1_atCA642342--1e-1At2g47540pollen Ole e 1 allergen and extensin family proteinO.I.H.G.S.X.
0.1011.30.80Ta.26450.1.A1_s_atCD490882--3e-2At1g70700TIFY7O.I.H.G.S.X.
0.034.70.80Ta.26188.1.A1_atCD452630--6e-1At3g02720DJ-1 family protein / protease-relatedO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
8.598.9GSM314260tissue type: seedling, root - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
7.098.5GSM111243genotype C10 developing seed at 5 days after anthesis, biological rep2GSE4935wheat expression level polymorphism study 39 genotypes 2 biological repsLink to GEO
6.898.4GSM314254tissue type: germinating seed, root - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
6.898.4GSM314256tissue type: germinating seed, root - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
6.798.4GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
6.498.2GSM314262tissue type: seedling, root - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
5.897.9GSM314261tissue type: seedling, root - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
5.497.7GSM298090Leaf tissue of Solstice at 5 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO
5.397.6GSM250895Tc_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.997.3GSM314255tissue type: germinating seed, root - rep2GSE12508Transcription patterns during wheat developmentLink to GEO

Inter-species module comparison

A co-expression module including the rice gene, Os12g0637300, orthologous to the query gene, TaAffx.57044.1.S1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.9799.9Os12g0637300At1g32480-Hypothetical protein3e-1At5g21280hydroxyproline-rich glycoprotein family proteinO.I.H.G.S.X.
0.4355.4Os01g0561500At1g32480-Conserved hypothetical protein4e+0At3g26690ATNUDX13 (ARABIDOPSIS THALIANA NUDIX HYDROLASE HOMOLOG 13)O.I.H.G.S.X.
0.3948.3Os06g0684900At1g32480--3e-6At2g35640hydroxyproline-rich glycoprotein family proteinO.I.H.G.S.X.
0.3846.9Os08g0153600At1g32480-Protein prenyltransferase domain containingprotein2e-1At5g40405-O.I.H.G.S.X.
0.3644.0Os02g0768200At1g32480-contains InterPro domain(s): IPR000348, IPR0090381e-1At1g21900emp24/gp25L/p24 family proteinO.I.H.G.S.X.
0.3644.0Os08g0112400At1g32480-TPR-like domain containing protein9e-2At1g71490pentatricopeptide (PPR) repeat-containing proteinO.I.H.G.S.X.
0.3541.7Os07g0436700At1g32480-Conserved hypothetical protein2e+0At3g15690biotin carboxyl carrier protein of acetyl-CoA carboxylase-relatedO.I.H.G.S.X.
0.3541.7Os03g0857200At1g32480-Conserved hypothetical protein2e+0At5g55550RNA recognition motif (RRM)-containing proteinO.I.H.G.S.X.
0.3440.0Os07g0158000At1g32480-Conserved hypothetical protein5e+0At3g13882structural constituent of ribosomeO.I.H.G.S.X.
0.3236.3Os07g0555300At1g32480-Hypothetical protein9e-2At3g22840ELIP1 (EARLY LIGHT-INDUCABLE PROTEIN)O.I.H.G.S.X.
0.3134.5Os08g0154200At1g32480-Hypothetical protein3e-9At1g20920DEAD box RNA helicase, putativeO.I.H.G.S.X.
0.2931.1Os06g0138200At1g32480-2OG-Fe(II) oxygenase domain containing protein5e-1At4g36780transcription regulatorO.I.H.G.S.X.
0.2831.1Os03g0399600At1g32480-Conserved hypothetical protein3e+0At4g32714SCRL25 (SCR-Like 25)O.I.H.G.S.X.
0.2625.6Os07g0685900At1g32480-Proteinase inhibitor I9, subtilisin propeptidedomain containing protein3e-1At5g59810SBT5.4O.I.H.G.S.X.
0.2625.6Os02g0621600At1g32480-Conserved hypothetical protein7e-1At2g06020myb family transcription factorO.I.H.G.S.X.
0.2524.1Os10g0207650At1g32480--1e+0At4g01995unknown proteinO.I.H.G.S.X.
0.2422.4Os01g0843200At1g32480--3e-3At2g35640hydroxyproline-rich glycoprotein family proteinO.I.H.G.S.X.
0.2321.2Os11g0106000At1g32480-Hypothetical protein5e-2At3g60490AP2 domain-containing transcription factor TINY, putativeO.I.H.G.S.X.
0.2219.4Os03g0603700At1g32480-Protein prenyltransferase domain containingprotein4e+0At5g55840pentatricopeptide (PPR) repeat-containing proteinO.I.H.G.S.X.
0.1813.7Os03g0686100At1g32480--8e-1At3g44330-O.I.H.G.S.X.
0.1813.7Os03g0329600At1g32480--1e+1At5g41440zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.1611.3Os01g0509700At1g32480-Hypothetical protein1e+0At4g34190SEP1 (STRESS ENHANCED PROTEIN 1)O.I.H.G.S.X.
0.1611.3Os07g0130400At1g32480-Protein kinase family protein1e-3At3g53810lectin protein kinase, putativeO.I.H.G.S.X.
0.1510.3Os07g0599100At1g32480-Disease resistance protein family protein3e+0At5g59590UGT76E2 (UDP-GLUCOSYL TRANSFERASE 76E2)O.I.H.G.S.X.
0.1510.3Os07g0173300At1g32480-Hypothetical protein7e-2At1g26890-O.I.H.G.S.X.
0.127.2Os08g0336200At1g32480-Hypothetical protein1e+0At1g12030unknown proteinO.I.H.G.S.X.
0.116.5Os06g0573800At1g32480-Hypothetical protein3e+0At5g07840ankyrin repeat family proteinO.I.H.G.S.X.
0.105.7Os02g0614700At1g32480-SPla/RYanodine receptor SPRY domain containingprotein1e+0At5g62500ATEB1B (END BINDING PROTEIN 1B)O.I.H.G.S.X.
0.105.7Os10g0130800At1g32480-NB-ARC domain containing protein5e-1At1g71440PFI (PFIFFERLING)O.I.H.G.S.X.
0.094.9Os02g0792050At1g32480--1e+0At4g33950OST1 (OPEN STOMATA 1)O.I.H.G.S.X.
0.094.9Os05g0569700At1g32480-UTP-ammonia ligase (Fragment)4e-18At3g12670emb2742 (embryo defective 2742)O.I.H.G.S.X.
0.094.9Os02g0543200At1g32480--4e+0At5g07540GRP16 (GLYCINE-RICH PROTEIN 16)O.I.H.G.S.X.
0.094.9Os01g0501100At1g32480--8e+0At4g39540shikimate kinase family proteinO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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