Co-expression analysis

Gene ID TaAffx.56717.1.S1_x_at
Gene name
Homology with ArabidopsisSimilar to At3g17160: unknown protein (HF=8e-1)
Module size 6 genes
NF 0.55
%ile 81.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6786.30.84TaAffx.56717.1.S1_x_atCA645855--8e-1At3g17160unknown proteinO.I.H.G.S.X.
0.8393.40.84Ta.20421.1.S1_atCD864906--3e+0At1g08350endomembrane protein 70 family proteinO.I.H.G.S.X.
0.6383.10.85Ta.21069.1.S1_x_atCA609019--5e+0At3g08990yippee family proteinO.I.H.G.S.X.
0.5979.80.82Ta.21069.1.S1_a_atCA609019--5e+0At3g08990yippee family proteinO.I.H.G.S.X.
0.4464.50.91Ta.21069.3.S1_x_atCA640631--2e+1At5g56610dual specificity protein phosphatase family proteinO.I.H.G.S.X.
0.2125.50.85TaAffx.111464.1.S1_atCA640078--4e+0At1g23510unknown proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
15.199.6GSM298094Crown tissue of Solstice at 9 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO
6.598.3GSM298076Crown tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
6.298.1GSM343688Wheat var. Kennedy_Fp inoculated_rep3GSE13660Gene expression analysis of the wheat response to infection by Fusarium pseudograminearumLink to GEO
6.298.1GSM298075Crown tissue of Paragon at 9 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
5.497.7GSM343685Wheat var. Kennedy_control_rep3GSE13660Gene expression analysis of the wheat response to infection by Fusarium pseudograminearumLink to GEO
5.297.5GSM314275tissue type: pistil, before anthesis - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
5.197.5GSM343682Wheat var. Kennedy_control_rep2GSE13660Gene expression analysis of the wheat response to infection by Fusarium pseudograminearumLink to GEO
5.197.5GSM343687Wheat var. Kennedy_Fp inoculated_rep2GSE13660Gene expression analysis of the wheat response to infection by Fusarium pseudograminearumLink to GEO
5.197.5GSM343678Wheat var. Kennedy_control_rep1GSE13660Gene expression analysis of the wheat response to infection by Fusarium pseudograminearumLink to GEO
4.697.0GSM138193genotype B33 developing seed at 5 days after anthesis, biological rep3GSE5939Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB locationLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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