Co-expression analysis

Gene ID	TaAffx.56717.1.S1_x_at
Gene name
Homology with Arabidopsis	Similar to At3g17160: unknown protein (HF=8e-1)
Module size	6 genes
NF	0.55
%ile	81.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.67	86.3	0.84	TaAffx.56717.1.S1_x_at	CA645855	-	-	8e-1	At3g17160	unknown protein	O.I.	H.G.	S.X.	Please select
0.83	93.4	0.84	Ta.20421.1.S1_at	CD864906	-	-	3e+0	At1g08350	endomembrane protein 70 family protein	O.I.	H.G.	S.X.	Please select
0.63	83.1	0.85	Ta.21069.1.S1_x_at	CA609019	-	-	5e+0	At3g08990	yippee family protein	O.I.	H.G.	S.X.	Please select
0.59	79.8	0.82	Ta.21069.1.S1_a_at	CA609019	-	-	5e+0	At3g08990	yippee family protein	O.I.	H.G.	S.X.	Please select
0.44	64.5	0.91	Ta.21069.3.S1_x_at	CA640631	-	-	2e+1	At5g56610	dual specificity protein phosphatase family protein	O.I.	H.G.	S.X.	Please select
0.21	25.5	0.85	TaAffx.111464.1.S1_at	CA640078	-	-	4e+0	At1g23510	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
15.1	99.6	GSM298094	Crown tissue of Solstice at 9 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
6.5	98.3	GSM298076	Crown tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
6.2	98.1	GSM343688	Wheat var. Kennedy_Fp inoculated_rep3	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
6.2	98.1	GSM298075	Crown tissue of Paragon at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
5.4	97.7	GSM343685	Wheat var. Kennedy_control_rep3	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
5.2	97.5	GSM314275	tissue type: pistil, before anthesis - rep1	GSE12508	Transcription patterns during wheat development
5.1	97.5	GSM343682	Wheat var. Kennedy_control_rep2	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
5.1	97.5	GSM343687	Wheat var. Kennedy_Fp inoculated_rep2	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
5.1	97.5	GSM343678	Wheat var. Kennedy_control_rep1	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
4.6	97.0	GSM138193	genotype B33 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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