Co-expression analysis

Gene ID TaAffx.5651.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At1g26450: beta-1,3-glucanase-related (HF=6e-1)
Module size 9 genes
NF 0.16
%ile 29.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8994.60.89TaAffx.5651.1.S1_atCA703738--6e-1At1g26450beta-1,3-glucanase-relatedO.I.H.G.S.X.
0.2227.10.95TaAffx.65565.2.S1_atBJ232957--3e-1At3g04370PDLP4 (PLASMODESMATA-LOCATED PROTEIN 4)O.I.H.G.S.X.
0.2024.00.94TaAffx.105558.1.S1_x_atCA732718--9e-1At2g28570unknown proteinO.I.H.G.S.X.
0.1922.40.94TaAffx.38637.2.S1_atCA654691--4e+0At4g12470protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinO.I.H.G.S.X.
0.1922.40.93Ta.1305.3.S1_atCA641627--7e-45At1g13950ELF5A-1 (EUKARYOTIC ELONGATION FACTOR 5A-1)O.I.H.G.S.X.
0.1112.40.95Ta.3911.2.S1_s_atCA604151--4e+0At2g44290protease inhibitor/seed storage/lipid transfer protein (LTP) family protein (YLS3)O.I.H.G.S.X.
0.1112.40.93TaAffx.65462.1.S1_atBJ245082--9e-1At3g18300unknown proteinO.I.H.G.S.X.
0.0910.40.94TaAffx.25008.1.S1_atCA708299--1e+1At5g24370invertase/pectin methylesterase inhibitor family proteinO.I.H.G.S.X.
0.089.40.94TaAffx.31212.1.S1_atCA618488--7e+0At5g20820auxin-responsive protein-relatedO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
10.299.2GSM298067Leaf tissue of Paragon at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
9.399.0GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
8.698.9GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
8.598.9GSM250895Tc_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
5.497.7GSM250899TcLr34_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
3.495.2GSM250897TcLr1_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
3.294.8GSM250896Tc_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
3.194.5GSM298090Leaf tissue of Solstice at 5 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO
2.893.6GSM298070Leaf tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
2.793.3GSM314286tissue type: 22 DAP embryo - rep3GSE12508Transcription patterns during wheat developmentLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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