Co-expression analysis

Gene ID TaAffx.56153.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At2g04800: unknown protein (HF=6e-1)
Module size 16 genes
NF 0.18
%ile 32.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8894.40.92TaAffx.56153.1.S1_atCA656635--6e-1At2g04800unknown proteinO.I.H.G.S.X.
0.2633.60.95TaAffx.12963.1.A1_atBJ215508--6e+0At3g10490anac052 (Arabidopsis NAC domain containing protein 52)O.I.H.G.S.X.
0.2532.10.95TaAffx.106849.3.S1_atBJ216171--1e-1At4g39410WRKY13O.I.H.G.S.X.
0.2430.30.95Ta.7804.1.S1_atBE471271--5e+0At4g31860protein phosphatase 2C, putative / PP2C, putativeO.I.H.G.S.X.
0.2329.00.94TaAffx.95075.1.S1_atBJ251238--1e+0At2g01818zinc ion bindingO.I.H.G.S.X.
0.2024.00.94Ta.24041.1.A1_x_atCA722251--1e+0At4g36240zinc finger (GATA type) family proteinO.I.H.G.S.X.
0.1922.40.93TaAffx.92443.1.S1_atBJ265992--5e+0At3g61678unknown proteinO.I.H.G.S.X.
0.1618.20.94TaAffx.26470.1.S1_atCA688638--4e+0At4g21610LOL2 (LSD ONE LIKE 2)O.I.H.G.S.X.
0.1517.10.93TaAffx.114288.2.A1_atBJ216129--3e-1At3g25780AOC3 (ALLENE OXIDE CYCLASE 3)O.I.H.G.S.X.
0.1415.80.94TaAffx.30598.1.S1_atCA623743--1e+0At3g05230signal peptidase subunit family proteinO.I.H.G.S.X.
0.1415.80.94TaAffx.35493.1.S1_atBQ606743--4e+0At5g07460PMSR2 (PEPTIDEMETHIONINE SULFOXIDE REDUCTASE 2)O.I.H.G.S.X.
0.1415.80.95Ta.13520.1.A1_atBQ171983--6e+0At5g36170HCF109 (HIGH CHLOROPHYLL FLUORESCENT 109)O.I.H.G.S.X.
0.1415.80.95Ta.30013.1.S1_atCK213051--1e-18At5g14390-O.I.H.G.S.X.
0.1314.60.95TaAffx.6443.2.S1_atCA636183--4e+0At4g35990-O.I.H.G.S.X.
0.0910.40.94TaAffx.80426.1.S1_atCA600418--4e-1At2g12935unknown proteinO.I.H.G.S.X.
0.0910.40.94TaAffx.31010.1.S1_atBG606650--9e+0At5g26640unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
12.199.4GSM324488Si- B+ rep2GSE12936Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildewLink to GEO
10.399.2GSM315203target strand labeled: Antisense - rep1GSE12528Wheat "Chinese Spring" natural antisense transcription surveyLink to GEO
8.398.8GSM324487Si- B+ rep1GSE12936Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildewLink to GEO
5.597.8GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.396.7GSM250895Tc_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
3.996.1GSM298092Crown tissue of Solstice at 3 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO
3.896.0GSM314279tissue type: anthers, before anthesis - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
3.795.8GSM314280tissue type: anthers, before anthesis - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
3.695.6GSM314255tissue type: germinating seed, root - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
3.495.2GSM298070Leaf tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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