Co-expression analysis

Gene ID	TaAffx.53861.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At4g23910: unknown protein (HF=2e-1)
Module size	9 genes
NF	0.42
%ile	66.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.84	93.6	0.75	TaAffx.53861.1.S1_at	CA688356	-	-	2e-1	At4g23910	unknown protein	O.I.	H.G.	S.X.	Please select
0.59	79.8	0.78	TaAffx.26294.1.S1_at	CA690278	-	-	4e+0	At1g05250	peroxidase, putative	O.I.	H.G.	S.X.	Please select
0.53	74.9	0.86	TaAffx.26241.1.S1_at	CA690736	-	-	4e+0	At2g43150	proline-rich extensin-like family protein	O.I.	H.G.	S.X.	Please select
0.40	58.4	0.90	TaAffx.6181.1.S1_at	CA690422	-	-	1e+1	At4g38540	monooxygenase, putative (MO2)	O.I.	H.G.	S.X.	Please select
0.35	49.8	0.90	TaAffx.26588.1.S1_at	CA687397	-	-	4e+0	At4g34131	UGT73B3 (UDP-glucosyl transferase 73B3)	O.I.	H.G.	S.X.	Please select
0.35	49.8	0.90	TaAffx.81732.1.S1_at	CA682508	-	-	1e+0	At1g61150	-	O.I.	H.G.	S.X.	Please select
0.32	44.4	0.90	TaAffx.6231.2.A1_at	CA689623	-	-	4e+0	At4g39300	unknown protein	O.I.	H.G.	S.X.	Please select
0.27	35.6	0.92	TaAffx.81414.1.S1_at	CA686327	-	-	4e+0	At2g43255	unknown protein	O.I.	H.G.	S.X.	Please select
0.15	17.1	0.91	TaAffx.53674.1.S1_at	CA690145	-	-	4e+0	At5g49410	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
87.2	100.0	GSM324488	Si- B+ rep2	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
42.8	99.9	GSM324487	Si- B+ rep1	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
9.5	99.1	GSM324489	Si- B+ rep3	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
4.4	96.8	GSM298058	Leaf tissue of Harnesk at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
4.1	96.4	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
3.7	95.8	GSM298067	Leaf tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
3.1	94.5	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
2.8	93.6	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
2.5	92.5	GSM138210	genotype B65 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
2.5	92.5	GSM246388	SB10_Stem_ rep1_at anthesis	GSE9767	Genotypic differences in water soluble carbohydrate metabolism in stem

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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