Co-expression analysis

Gene ID TaAffx.52853.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At3g01630: - (HF=7e-5)
Module size 26 genes
NF 0.41
%ile 64.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7389.10.92TaAffx.52853.1.S1_atCA597526--7e-5At3g01630-O.I.H.G.S.X.
0.7188.00.94TaAffx.38815.1.A1_atBJ216899--1e+0At5g24170-O.I.H.G.S.X.
0.6786.30.95TaAffx.38217.1.S1_atBJ244494--7e+0At5g11690ATTIM17-3O.I.H.G.S.X.
0.5576.80.94TaAffx.24685.1.S1_atCA714323--3e+0At2g36080DNA-binding protein, putativeO.I.H.G.S.X.
0.5273.70.94TaAffx.38217.1.S1_x_atBJ244494--7e+0At5g11690ATTIM17-3O.I.H.G.S.X.
0.5173.00.94Ta.5523.2.S1_a_atBJ243328--4e+0At5g47600heat shock protein-relatedO.I.H.G.S.X.
0.4869.00.95TaAffx.78517.1.S1_atCA731451--4e+0At2g25720unknown proteinO.I.H.G.S.X.
0.4869.00.93TaAffx.99206.1.S1_atCA727631--3e-1At4g21610LOL2 (LSD ONE LIKE 2)O.I.H.G.S.X.
0.4666.80.94TaAffx.7591.1.S1_atCA656091--2e+1Atmg01020-O.I.H.G.S.X.
0.4666.80.94TaAffx.64156.1.S1_atBJ313261--4e+0At5g19830aminoacyl-tRNA hydrolaseO.I.H.G.S.X.
0.4565.20.94TaAffx.107754.1.S1_atCD876350--1e+0At2g21780unknown proteinO.I.H.G.S.X.
0.4464.50.94TaAffx.77881.1.S1_atCA741326--2e+1Atcg00065-O.I.H.G.S.X.
0.4464.50.94Ta.7070.3.S1_x_atCA693027--3e+0At5g63400ADK1 (ADENYLATE KINASE 1)O.I.H.G.S.X.
0.4362.20.94Ta.2167.3.S1_a_atCA647226--3e-13At3g06050PRXIIF (PEROXIREDOXIN IIF)O.I.H.G.S.X.
0.4260.90.94Ta.11314.2.S1_x_atCA619157--4e+0At5g40500unknown proteinO.I.H.G.S.X.
0.4260.90.93TaAffx.110671.1.S1_x_atCA654548--1e+0At3g07460unknown proteinO.I.H.G.S.X.
0.4260.90.94TaAffx.105893.1.S1_atCA728292--3e-1At1g74890ARR15 (RESPONSE REGULATOR 15)O.I.H.G.S.X.
0.4260.90.94TaAffx.105893.1.S1_x_atCA728292--3e-1At1g74890ARR15 (RESPONSE REGULATOR 15)O.I.H.G.S.X.
0.4159.60.95Ta.30411.1.S1_atCK209297--5e+0At5g62280unknown proteinO.I.H.G.S.X.
0.3956.10.94TaAffx.110759.1.S1_atCA654729--1e+0At4g35820oxidoreductase, 2OG-Fe(II) oxygenase family proteinO.I.H.G.S.X.
0.3244.40.94TaAffx.105451.1.S1_atCA734135--1e+0At3g06730thioredoxin family proteinO.I.H.G.S.X.
0.3142.70.94TaAffx.113756.1.S1_atCA605644--1e-3At5g04250OTU-like cysteine protease family proteinO.I.H.G.S.X.
0.2839.20.94TaAffx.107179.1.S1_atCA704854--8e-1At3g60760unknown proteinO.I.H.G.S.X.
0.2532.10.95TaAffx.118620.1.S1_atBJ316617--1e+0At2g31560unknown proteinO.I.H.G.S.X.
0.1415.80.94TaAffx.54509.1.S1_atCA680633--2e-2At4g38250amino acid transporter family proteinO.I.H.G.S.X.
0.1314.60.94TaAffx.53978.1.S1_atCD872405--1e+0At5g03380heavy-metal-associated domain-containing proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
7.998.7GSM250895Tc_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
6.898.4GSM298067Leaf tissue of Paragon at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
6.598.3GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
5.998.0GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
5.597.8GSM250899TcLr34_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
5.297.5GSM250897TcLr1_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
3.896.0GSM250896Tc_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
3.896.0GSM314276tissue type: pistil, before anthesis - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
3.896.0GSM298070Leaf tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
3.695.6GSM314277tissue type: pistil, before anthesis - rep3GSE12508Transcription patterns during wheat developmentLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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