Co-expression analysis

Gene ID TaAffx.52559.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At2g18660: EXLB3 (EXPANSIN-LIKE B3 PRECURSOR) (HF=2e+0)
Module size 8 genes
NF 0.22
%ile 37.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.4869.00.73TaAffx.52559.1.S1_atCA705493--2e+0At2g18660EXLB3 (EXPANSIN-LIKE B3 PRECURSOR)O.I.H.G.S.X.
0.3549.80.88TaAffx.106563.2.S1_atCA690184--1e+1At4g19100unknown proteinO.I.H.G.S.X.
0.3346.90.85TaAffx.628.1.A1_x_atBQ168608--4e+0At5g15290integral membrane family proteinO.I.H.G.S.X.
0.2532.10.89Ta.28090.2.S1_atCA599290--3e-1At5g11080ubiquitin family proteinO.I.H.G.S.X.
0.2329.00.89TaAffx.80681.1.S1_atCA694032--3e+0At3g03160unknown proteinO.I.H.G.S.X.
0.2329.00.90Ta.5770.2.S1_x_atCA670183--4e+0At2g44578protein binding / zinc ion bindingO.I.H.G.S.X.
0.1821.00.88TaAffx.72471.1.S1_atCA725188--1e+0At2g27940zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.056.70.83TaAffx.15855.1.S1_atBQ802932--6e+0At3g43430zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
8.898.9GSM138161genotype A91 developing seed at 5 days after anthesis, biological rep3GSE5939Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB locationLink to GEO
7.898.7GSM298070Leaf tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
5.998.0GSM298092Crown tissue of Solstice at 3 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO
4.997.3GSM298067Leaf tissue of Paragon at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
4.396.7GSM111229genotype B65 developing seed at 5 days after anthesis, biological rep2GSE4935wheat expression level polymorphism study 39 genotypes 2 biological repsLink to GEO
4.396.7GSM298076Crown tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
4.396.7GSM315203target strand labeled: Antisense - rep1GSE12528Wheat "Chinese Spring" natural antisense transcription surveyLink to GEO
4.296.6GSM111233genotype H8 developing seed at 5 days after anthesis, biological rep2GSE4935wheat expression level polymorphism study 39 genotypes 2 biological repsLink to GEO
3.896.0GSM111174genotype G30 developing seed at 5 days after anthesis, biological rep1GSE4935wheat expression level polymorphism study 39 genotypes 2 biological repsLink to GEO
3.795.8GSM314279tissue type: anthers, before anthesis - rep2GSE12508Transcription patterns during wheat developmentLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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