Co-expression analysis

Gene ID TaAffx.52427.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At1g03680: ATHM1 (HF=2e-2)
Module size 6 genes
NF 0.16
%ile 29.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.20.95TaAffx.52427.1.S1_atCA707957--2e-2At1g03680ATHM1O.I.H.G.S.X.
0.4058.40.96Ta.13621.1.S1_atBQ171971--2e-19At2g36895unknown proteinO.I.H.G.S.X.
0.3142.70.97Ta.5401.1.S1_a_atCD872229--2e-1At2g39400hydrolase, alpha/beta fold family proteinO.I.H.G.S.X.
0.2227.10.96Ta.24763.1.S1_atCK215425--8e-13At1g52870peroxisomal membrane protein-relatedO.I.H.G.S.X.
0.089.40.97TaAffx.108499.1.S1_atCA687681--3e-11At1g21065unknown proteinO.I.H.G.S.X.
0.067.60.96Ta.22659.1.S1_atCK215153--4e-21At5g61670-O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
38.599.9GSM324488Si- B+ rep2GSE12936Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildewLink to GEO
30.999.9GSM324487Si- B+ rep1GSE12936Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildewLink to GEO
10.299.2GSM314257tissue type: germinating seed, embryo - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
9.499.1GSM298070Leaf tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
9.399.0GSM314258tissue type: germinating seed, embryo - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
9.199.0GSM314259tissue type: germinating seed, embryo - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
8.298.8GSM314252tissue type: germinating seed, coleoptile - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
8.198.8GSM314251tissue type: germinating seed, coleoptile - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
6.998.4GSM314253tissue type: germinating seed, coleoptile - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
4.797.1GSM298067Leaf tissue of Paragon at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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