Co-expression analysis

Gene ID TaAffx.52323.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At5g27238: - (HF=4e+0)
Module size 39 genes
NF 0.49
%ile 75.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9398.70.93TaAffx.52323.1.S1_atCA709364--4e+0At5g27238-O.I.H.G.S.X.
0.7790.80.93Ta.29473.2.S1_atCA639692--1e-3At5g58110ATPase activator/ chaperone bindingO.I.H.G.S.X.
0.6684.10.94TaAffx.8774.1.S1_atCA620394--1e+1At5g14130peroxidase, putativeO.I.H.G.S.X.
0.6282.30.94TaAffx.91595.1.S1_atBJ305839--1e+0At5g66590allergen V5/Tpx-1-related family proteinO.I.H.G.S.X.
0.6282.30.93TaAffx.62788.1.S1_atBQ606815--4e+0At1g71780unknown proteinO.I.H.G.S.X.
0.6182.00.94TaAffx.92350.1.S1_atBJ269587--1e+0At5g47306unknown proteinO.I.H.G.S.X.
0.6081.00.94TaAffx.85343.1.S1_atCA623566--4e+0At5g34828-O.I.H.G.S.X.
0.6081.00.94TaAffx.82014.1.S1_atCA678857--1e+0At1g45063copper ion binding / electron carrierO.I.H.G.S.X.
0.6081.00.94TaAffx.119601.1.S1_atBJ266980--9e+0At5g59950RNA and export factor-binding protein, putativeO.I.H.G.S.X.
0.5979.80.94Ta.2937.3.S1_atBJ207642--1e+0At5g42330unknown proteinO.I.H.G.S.X.
0.5879.20.94Ta.16180.1.A1_atBJ322793--1e+0At1g034102A6O.I.H.G.S.X.
0.5779.20.95Ta.21581.1.S1_atCA696527--4e+0At2g36460fructose-bisphosphate aldolase, putativeO.I.H.G.S.X.
0.5576.80.93Ta.5079.2.S1_x_atCA654780--3e-1At3g16140PSAH-1 (photosystem I subunit H-1)O.I.H.G.S.X.
0.5374.90.94TaAffx.58994.1.S1_atCA610461--4e+0At3g52510-O.I.H.G.S.X.
0.5273.70.94TaAffx.85428.1.S1_atCA622833--4e+0At5g42000ORMDL family proteinO.I.H.G.S.X.
0.5173.00.94TaAffx.117373.1.S1_atBQ605838--1e+0At3g10400RNA recognition motif (RRM)-containing proteinO.I.H.G.S.X.
0.5173.00.93TaAffx.120245.1.S1_atBJ234869--1e-1At4g17800DNA-binding protein-relatedO.I.H.G.S.X.
0.5072.40.94TaAffx.24121.1.S1_atCA724779--2e-1At1g11590pectin methylesterase, putativeO.I.H.G.S.X.
0.4869.00.93TaAffx.12517.1.S1_atBJ257824--1e+0At5g34581hydroxyproline-rich glycoprotein family proteinO.I.H.G.S.X.
0.4869.00.94Ta.6762.3.S1_atBJ246546--1e+0At5g61490-O.I.H.G.S.X.
0.4565.20.94TaAffx.78855.1.S1_atCA725651--5e-2At1g49930-O.I.H.G.S.X.
0.4464.50.95TaAffx.51594.1.S1_atCA723204--1e+0At3g51810EM1 (LATE EMBRYOGENESIS ABUNDANT 1)O.I.H.G.S.X.
0.4362.20.95TaAffx.5596.1.S1_atCA705635--3e+0At1g12250thylakoid lumenal protein-relatedO.I.H.G.S.X.
0.4260.90.94Ta.16201.1.S1_atCA602442--3e+0At5g57535unknown proteinO.I.H.G.S.X.
0.4260.90.94Ta.26652.1.A1_atCD491481--1e-3At1g36050unknown proteinO.I.H.G.S.X.
0.4260.90.94TaAffx.132656.2.S1_atCA600729--1e+0At1g76500SOB3 (SUPPRESSOR OF PHYB-4#3)O.I.H.G.S.X.
0.4058.40.95TaAffx.55653.1.S1_atCA663094--1e+1At4g20030RNA recognition motif (RRM)-containing proteinO.I.H.G.S.X.
0.4058.40.95Ta.3911.2.S1_s_atCA604151--4e+0At2g44290protease inhibitor/seed storage/lipid transfer protein (LTP) family protein (YLS3)O.I.H.G.S.X.
0.4058.40.93TaAffx.111590.1.S1_atCA637180--1e+0At1g01990-O.I.H.G.S.X.
0.4058.40.94TaAffx.35493.1.S1_atBQ606743--4e+0At5g07460PMSR2 (PEPTIDEMETHIONINE SULFOXIDE REDUCTASE 2)O.I.H.G.S.X.
0.3956.10.94Ta.3501.3.A1_atCA658638--3e-1At5g08330TCP family transcription factor, putativeO.I.H.G.S.X.
0.3956.10.95Ta.6759.2.S1_x_atBJ211299--2e+0At5g63310NDPK2 (NUCLEOSIDE DIPHOSPHATE KINASE 2)O.I.H.G.S.X.
0.3956.10.95Ta.18019.2.S1_atCA625748--1e+0At1g32700zinc-binding family proteinO.I.H.G.S.X.
0.3956.10.95TaAffx.85941.1.S1_atCA618291--2e+1At5g23760heavy-metal-associated domain-containing proteinO.I.H.G.S.X.
0.3854.70.94TaAffx.6157.1.S1_atCA690748--4e+0At2g42930glycosyl hydrolase family protein 17O.I.H.G.S.X.
0.3651.90.94TaAffx.80426.1.S1_atCA600418--4e-1At2g12935unknown proteinO.I.H.G.S.X.
0.3448.10.93TaAffx.111311.1.S1_atCA643595--1e+0At1g61940AtTLP4 (TUBBY LIKE PROTEIN 4)O.I.H.G.S.X.
0.3040.90.95TaAffx.3664.1.S1_atCD876496--2e+0At2g47710universal stress protein (USP) family proteinO.I.H.G.S.X.
0.2939.20.96Ta.6759.2.S1_atBJ211299--2e+0At5g63310NDPK2 (NUCLEOSIDE DIPHOSPHATE KINASE 2)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
8.098.8GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
7.298.5GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
7.098.5GSM298070Leaf tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
6.098.0GSM324487Si- B+ rep1GSE12936Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildewLink to GEO
5.397.6GSM250899TcLr34_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
5.097.4GSM298092Crown tissue of Solstice at 3 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO
4.997.3GSM324488Si- B+ rep2GSE12936Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildewLink to GEO
4.596.9GSM250896Tc_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.396.7GSM250895Tc_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.396.7GSM314261tissue type: seedling, root - rep2GSE12508Transcription patterns during wheat developmentLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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