Co-expression analysis

Gene ID	TaAffx.52035.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At5g61412: unknown protein (HF=1e-2)
Module size	6 genes
NF	0.01
%ile	3.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.2	0.80	TaAffx.52035.1.S1_at	CA714343	-	-	1e-2	At5g61412	unknown protein	O.I.	H.G.	S.X.	Please select
0.04	5.8	0.89	TaAffx.37081.1.S1_at	BJ301931	-	-	4e+0	At2g31560	unknown protein	O.I.	H.G.	S.X.	Please select
0.03	4.7	0.91	TaAffx.28239.1.S1_at	CA663013	-	-	2e+0	At1g11785	unknown protein	O.I.	H.G.	S.X.	Please select
0.03	4.7	0.90	TaAffx.23355.1.S1_at	CA736144	-	-	1e+1	At4g33220	enzyme inhibitor/ pectinesterase	O.I.	H.G.	S.X.	Please select
0.02	3.6	0.92	TaAffx.35248.1.S1_at	CA731653	-	-	1e+0	At3g20620	F-box family protein-related	O.I.	H.G.	S.X.	Please select
-	0.7	0.88	TaAffx.107803.1.S1_at	CA695052	-	-	3e-2	At5g27440	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
10.7	99.2	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
5.4	97.7	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.2	97.5	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.1	97.5	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
5.1	97.5	GSM246384	SB165_Stem_ rep1_at anthesis	GSE9767	Genotypic differences in water soluble carbohydrate metabolism in stem
4.5	96.9	GSM250914	Tc_7dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.3	96.7	GSM138153	genotype G32 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
4.2	96.6	GSM250897	TcLr1_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.1	96.4	GSM143501	Jupateco_Lr34 (susceptible), mock inoculated distal leaf, replication 3	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
4.1	96.4	GSM250895	Tc_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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