Co-expression analysis

Gene ID	TaAffx.51916.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At4g26010: peroxidase, putative (HF=3e+0)
Module size	6 genes
NF	0.52
%ile	78.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.55	76.8	0.92	TaAffx.51916.1.S1_at	CA716507	-	-	3e+0	At4g26010	peroxidase, putative	O.I.	H.G.	S.X.	Please select
0.55	76.8	0.91	TaAffx.9551.1.S1_at	CA595241	-	-	1e+0	At2g36410	unknown protein	O.I.	H.G.	S.X.	Please select
0.55	76.8	0.92	TaAffx.14645.2.S1_at	CA737527	-	-	9e-1	At3g32100	unknown protein	O.I.	H.G.	S.X.	Please select
0.44	64.5	0.92	TaAffx.79610.1.S1_at	CA711937	-	-	9e-1	At1g26762	unknown protein	O.I.	H.G.	S.X.	Please select
0.40	58.4	0.93	RPTR-Ta-L36849-1_at	RPTR-Ta-L36849-1	-	-			-	O.I.	H.G.	S.X.	Please select
0.33	46.9	0.93	TaAffx.23406.1.S1_at	CA735527	-	-	9e-4	At3g53610	ATRAB8	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
20.4	99.7	GSM143522	Thatcher_Lr34 (susceptible), mock inoculated basal leaf, replication 2	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
12.8	99.4	GSM315203	target strand labeled: Antisense - rep1	GSE12528	Wheat "Chinese Spring" natural antisense transcription survey
12.6	99.4	GSM298067	Leaf tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
12.2	99.4	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
11.2	99.3	GSM250895	Tc_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
7.5	98.6	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
6.8	98.4	GSM250897	TcLr1_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.8	97.2	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
3.6	95.6	GSM111236	genotype F38b developing seed at 5 days after anthesis, biological rep1	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
3.4	95.2	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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