Co-expression analysis

Gene ID	TaAffx.51913.1.S1_x_at
Gene name
Homology with Arabidopsis	Similar to At5g56110: ATMYB103 (ARABIDOPSIS THALIANA MYB DOMAIN PROTEIN 103) (HF=8e-1)
Module size	13 genes
NF	0.63
%ile	88.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.64	83.6	0.93	TaAffx.51913.1.S1_x_at	CA716536	-	-	8e-1	At5g56110	ATMYB103 (ARABIDOPSIS THALIANA MYB DOMAIN PROTEIN 103)	O.I.	H.G.	S.X.	Please select
0.82	92.7	0.93	TaAffx.9337.1.S1_at	CA602090	-	-	4e+0	At2g30130	ASL5	O.I.	H.G.	S.X.	Please select
0.75	89.8	0.94	TaAffx.105943.1.S1_at	CA727514	-	-	2e+1	At5g07470	PMSR3 (PEPTIDEMETHIONINE SULFOXIDE REDUCTASE 3)	O.I.	H.G.	S.X.	Please select
0.73	89.1	0.93	TaAffx.110614.4.S1_at	CA605907	-	-	3e-1	At4g14630	GLP9 (GERMIN-LIKE PROTEIN 9)	O.I.	H.G.	S.X.	Please select
0.71	88.0	0.93	TaAffx.112440.1.S1_at	CA621396	-	-	4e-1	At3g11050	ATFER2 (ferritin 2)	O.I.	H.G.	S.X.	Please select
0.64	83.6	0.93	TaAffx.51734.1.S1_x_at	CA719694	-	-	2e+0	At1g02780	emb2386 (embryo defective 2386)	O.I.	H.G.	S.X.	Please select
0.63	83.1	0.93	TaAffx.13750.2.A1_at	CA647055	-	-	4e+0	At5g51545	LPA2 (low psii accumulation2)	O.I.	H.G.	S.X.	Please select
0.59	79.8	0.94	TaAffx.105981.1.S1_at	CA727065	-	-	3e-1	At4g11870	unknown protein	O.I.	H.G.	S.X.	Please select
0.56	78.6	0.93	Ta.16453.1.S1_at	CA606648	-	-	1e+0	At4g29650	cytidine deaminase 4 (CDA4) (desH) / cytidine aminohydrolase	O.I.	H.G.	S.X.	Please select
0.55	76.8	0.93	TaAffx.13785.2.S1_at	CA708591	-	-	7e-8	At2g34690	ACD11 (ACCELERATED CELL DEATH 11)	O.I.	H.G.	S.X.	Please select
0.52	73.7	0.95	Ta.19591.2.A1_a_at	CA651113	-	-	4e+0	At5g11500	unknown protein	O.I.	H.G.	S.X.	Please select
0.50	72.4	0.93	TaAffx.110665.1.S1_at	CA656430	-	-	4e+0	At2g33250	unknown protein	O.I.	H.G.	S.X.	Please select
0.45	65.2	0.94	TaAffx.64914.1.S1_at	BJ270115	-	-	4e+0	At1g51915	cryptdin protein-related	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
13.2	99.5	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
10.2	99.2	GSM314261	tissue type: seedling, root - rep2	GSE12508	Transcription patterns during wheat development
8.8	98.9	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
7.9	98.7	GSM314262	tissue type: seedling, root - rep3	GSE12508	Transcription patterns during wheat development
6.0	98.0	GSM298067	Leaf tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
4.6	97.0	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.6	95.6	GSM250896	Tc_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.6	95.6	GSM250895	Tc_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.6	95.6	GSM298078	Leaf tissue of Solstice at 3 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
3.4	95.2	GSM111233	genotype H8 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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