Co-expression analysis

Gene ID TaAffx.51867.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At1g29680: unknown protein (HF=2e-1)
Module size 8 genes
NF 0.30
%ile 48.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5072.40.71TaAffx.51867.1.S1_atCA717368--2e-1At1g29680unknown proteinO.I.H.G.S.X.
0.4058.40.90Ta.10754.1.S1_atBQ166469--1e+0At5g40980unknown proteinO.I.H.G.S.X.
0.3549.80.89TaAffx.64431.1.A1_atBJ299187--3e+0At3g32920ATP binding / DNA binding / DNA-dependent ATPase/ nucleoside-triphosphatase/ nucleotide bindingO.I.H.G.S.X.
0.3142.70.88Ta.5840.1.S1_atBJ306840--2e-7At4g12130aminomethyltransferaseO.I.H.G.S.X.
0.2329.00.87Ta.8171.1.A1_atCK196888--2e+0At4g37608unknown proteinO.I.H.G.S.X.
0.2329.00.87TaAffx.70031.1.A1_atAJ611578--8e-2At4g36105unknown proteinO.I.H.G.S.X.
0.2125.50.87Ta.25345.1.A1_atCD374082--1e+0At2g42860unknown proteinO.I.H.G.S.X.
0.2024.00.85TaAffx.51811.1.S1_atCA718648--1e+0At1g19086unknown proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
13.299.5GSM314289tissue type: 22 DAP endosperm - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
9.699.1GSM298070Leaf tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
7.698.7GSM298067Leaf tissue of Paragon at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
7.598.6GSM314288tissue type: 22 DAP endosperm - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
6.298.1GSM314287tissue type: 22 DAP endosperm - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
4.797.1GSM298090Leaf tissue of Solstice at 5 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO
4.596.9GSM298077Leaf tissue of Solstice at 3 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
4.496.8GSM298092Crown tissue of Solstice at 3 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO
4.096.3GSM250895Tc_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
3.996.1GSM111233genotype H8 developing seed at 5 days after anthesis, biological rep2GSE4935wheat expression level polymorphism study 39 genotypes 2 biological repsLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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