Co-expression analysis

Gene ID	TaAffx.51578.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At3g20310: ERF7 (ETHYLINE RESPONSE FACTOR 7) (HF=2e-1)
Module size	10 genes
NF	0.22
%ile	37.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.39	56.1	0.71	TaAffx.51578.1.S1_at	CA723473	-	-	2e-1	At3g20310	ERF7 (ETHYLINE RESPONSE FACTOR 7)	O.I.	H.G.	S.X.	Please select
0.47	67.9	0.85	Ta.12055.1.S1_x_at	BQ171493	-	-	3e+0	At2g42660	myb family transcription factor	O.I.	H.G.	S.X.	Please select
0.43	62.2	0.89	Ta.12055.1.S1_s_at	BQ171493	-	-	3e+0	At2g42660	myb family transcription factor	O.I.	H.G.	S.X.	Please select
0.36	51.9	0.69	TaAffx.113423.1.S1_at	CA612822	-	-	6e-2	At1g50740	unknown protein	O.I.	H.G.	S.X.	Please select
0.33	46.9	0.95	Ta.21241.1.S1_at	CA608412	-	-	1e+1	At3g60660	unknown protein	O.I.	H.G.	S.X.	Please select
0.31	42.7	0.88	Ta.759.1.S1_at	U73216.1	cold acclimation protein WCOR413	-	6e-1	At3g50830	COR413-PM2 (COLD-REGULATED 413-PLASMA MEMBRANE 2)	O.I.	H.G.	S.X.	Please select
0.27	35.6	0.79	Ta.9099.3.S1_x_at	CD937856	-	-	2e+0	At1g62820	calmodulin, putative	O.I.	H.G.	S.X.	Please select
0.12	13.3	0.74	Ta.28862.1.S1_at	CA609143	-	-	4e+0	At1g22990	heavy-metal-associated domain-containing protein / copper chaperone (CCH)-related	O.I.	H.G.	S.X.	Please select
0.12	13.3	0.76	TaAffx.28425.1.S1_at	CA660343	-	-	4e+0	At3g11690	unknown protein	O.I.	H.G.	S.X.	Please select
0.09	10.4	0.81	TaAffx.110147.1.S1_at	BG905569	-	-	1e+1	At4g37409	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
7.8	98.7	GSM250914	Tc_7dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.2	97.5	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.9	97.3	GSM298091	Leaf tissue of Solstice at 9 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
4.8	97.2	GSM250912	TcLr34_7dpi_inoculated_rep2	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.6	97.0	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
4.5	96.9	GSM250894	TcLr34_3dpi_inoculated_rep2	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.2	96.6	GSM250902	Tc_7dpi_inoculated_rep1	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.1	96.4	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.0	96.3	GSM250908	Tc_7dpi_inoculated_rep2	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.7	95.8	GSM298081	Leaf tissue of Solstice at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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