Co-expression analysis

Gene ID	TaAffx.51452.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At5g56369: - (HF=1e+1)
Module size	6 genes
NF	0.62
%ile	87.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.2	0.95	TaAffx.51452.1.S1_at	CA724758	-	-	1e+1	At5g56369	-	O.I.	H.G.	S.X.	Please select
0.67	86.3	0.95	TaAffx.66653.1.S1_at	BG907780	-	-	1e+1	At5g37550	unknown protein	O.I.	H.G.	S.X.	Please select
0.67	86.3	0.96	TaAffx.51452.1.S1_x_at	CA724758	-	-	1e+1	At5g56369	-	O.I.	H.G.	S.X.	Please select
0.60	81.0	0.95	Ta.25522.2.S1_x_at	CA683586	-	-	2e-1	At4g13560	UNE15 (unfertilized embryo sac 15)	O.I.	H.G.	S.X.	Please select
0.43	62.2	0.95	TaAffx.113756.1.S1_at	CA605644	-	-	1e-3	At5g04250	OTU-like cysteine protease family protein	O.I.	H.G.	S.X.	Please select
0.29	39.2	0.95	TaAffx.107578.1.S1_at	CA697808	-	-	1e+0	At3g14080	small nuclear ribonucleoprotein, putative / snRNP, putative / Sm protein, putative	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
11.5	99.3	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
10.8	99.2	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
9.1	99.0	GSM250899	TcLr34_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
8.8	98.9	GSM250895	Tc_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
8.0	98.8	GSM250897	TcLr1_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
6.9	98.4	GSM250896	Tc_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.8	97.9	GSM298067	Leaf tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
4.0	96.3	GSM298079	Leaf tissue of Solstice at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
3.2	94.8	GSM298090	Leaf tissue of Solstice at 5 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
3.2	94.8	GSM324488	Si- B+ rep2	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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