Co-expression analysis

Gene ID	TaAffx.51433.1.S1_x_at
Gene name
Homology with Arabidopsis	Similar to At4g34700: complex 1 family protein / LVR family protein (HF=1e+0)
Module size	6 genes
NF	0.15
%ile	28.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.50	72.4	0.87	TaAffx.51433.1.S1_x_at	CA725024	-	-	1e+0	At4g34700	complex 1 family protein / LVR family protein	O.I.	H.G.	S.X.	Please select
0.40	58.4	0.88	TaAffx.37405.1.S1_at	BJ281037	-	-	2e+1	At5g59410	-	O.I.	H.G.	S.X.	Please select
0.36	51.9	0.88	TaAffx.56398.1.S1_at	CA652546	-	-	4e+0	At1g02360	chitinase, putative	O.I.	H.G.	S.X.	Please select
0.17	19.8	0.89	TaAffx.29629.1.S1_at	CA638499	-	-	3e-1	At3g47550	zinc finger (C3HC4-type RING finger) family protein	O.I.	H.G.	S.X.	Please select
0.15	17.1	0.88	Ta.952.2.S1_x_at	CA640640	-	-	4e+0	At2g34850	MEE25 (maternal effect embryo arrest 25)	O.I.	H.G.	S.X.	Please select
0.04	5.8	0.89	Ta.24627.3.S1_at	CA609321	-	-	4e+0	At1g31580	ECS1	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
40.8	99.9	GSM315203	target strand labeled: Antisense - rep1	GSE12528	Wheat "Chinese Spring" natural antisense transcription survey
21.7	99.8	GSM314261	tissue type: seedling, root - rep2	GSE12508	Transcription patterns during wheat development
21.3	99.7	GSM314262	tissue type: seedling, root - rep3	GSE12508	Transcription patterns during wheat development
10.2	99.2	GSM314260	tissue type: seedling, root - rep1	GSE12508	Transcription patterns during wheat development
7.6	98.7	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
5.4	97.7	GSM314277	tissue type: pistil, before anthesis - rep3	GSE12508	Transcription patterns during wheat development
5.1	97.5	GSM314254	tissue type: germinating seed, root - rep1	GSE12508	Transcription patterns during wheat development
5.0	97.4	GSM143498	Jupateco_Lr34 (susceptible), mock inoculated basal leaf, replication 3	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
4.2	96.6	GSM246394	SB69_Stem_ rep1_at anthesis	GSE9767	Genotypic differences in water soluble carbohydrate metabolism in stem
4.2	96.6	GSM250899	TcLr34_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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