Co-expression analysis

Gene ID TaAffx.51433.1.S1_x_at
Gene name
Homology with ArabidopsisSimilar to At4g34700: complex 1 family protein / LVR family protein (HF=1e+0)
Module size 6 genes
NF 0.15
%ile 28.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5072.40.87TaAffx.51433.1.S1_x_atCA725024--1e+0At4g34700complex 1 family protein / LVR family proteinO.I.H.G.S.X.
0.4058.40.88TaAffx.37405.1.S1_atBJ281037--2e+1At5g59410-O.I.H.G.S.X.
0.3651.90.88TaAffx.56398.1.S1_atCA652546--4e+0At1g02360chitinase, putativeO.I.H.G.S.X.
0.1719.80.89TaAffx.29629.1.S1_atCA638499--3e-1At3g47550zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.1517.10.88Ta.952.2.S1_x_atCA640640--4e+0At2g34850MEE25 (maternal effect embryo arrest 25)O.I.H.G.S.X.
0.045.80.89Ta.24627.3.S1_atCA609321--4e+0At1g31580ECS1O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
40.899.9GSM315203target strand labeled: Antisense - rep1GSE12528Wheat "Chinese Spring" natural antisense transcription surveyLink to GEO
21.799.8GSM314261tissue type: seedling, root - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
21.399.7GSM314262tissue type: seedling, root - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
10.299.2GSM314260tissue type: seedling, root - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
7.698.7GSM298070Leaf tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
5.497.7GSM314277tissue type: pistil, before anthesis - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
5.197.5GSM314254tissue type: germinating seed, root - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
5.097.4GSM143498Jupateco_Lr34 (susceptible), mock inoculated basal leaf, replication 3GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halvesLink to GEO
4.296.6GSM246394SB69_Stem_ rep1_at anthesisGSE9767Genotypic differences in water soluble carbohydrate metabolism in stemLink to GEO
4.296.6GSM250899TcLr34_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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